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bioconductor-degreport
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public |
Report of DEG analysis
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2024-12-25 |
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bioconductor-structtoolbox
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public |
Data processing & analysis tools for Metabolomics and other omics
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2024-12-25 |
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bioconductor-metmashr
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public |
Metabolite Mashing with R
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2024-12-25 |
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bioconductor-censcyt
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public |
Differential abundance analysis with a right censored covariate in high-dimensional cytometry
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2024-12-25 |
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bioconductor-treekor
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public |
Cytometry Cluster Hierarchy and Cellular-to-phenotype Associations
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2024-12-25 |
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bioconductor-micsqtl
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public |
MICSQTL (Multi-omic deconvolution, Integration and Cell-type-specific Quantitative Trait Loci)
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2024-12-25 |
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bioconductor-gloscope
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public |
Population-level Representation on scRNA-Seq data
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2024-12-25 |
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bioconductor-aggregatebiovar
|
public |
Differential Gene Expression Analysis for Multi-subject scRNA-seq
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2024-12-25 |
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bioconductor-metaneighbor
|
public |
Single cell replicability analysis
|
2024-12-25 |
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bioconductor-chetah
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public |
Fast and accurate scRNA-seq cell type identification
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2024-12-25 |
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bioconductor-nebulosa
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public |
Single-Cell Data Visualisation Using Kernel Gene-Weighted Density Estimation
|
2024-12-25 |
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bioconductor-schot
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public |
single-cell higher order testing
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2024-12-25 |
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bioconductor-tidysinglecellexperiment
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public |
Brings SingleCellExperiment to the Tidyverse
|
2024-12-25 |
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bioconductor-zellkonverter
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public |
Conversion Between scRNA-seq Objects
|
2024-12-25 |
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bioconductor-spotlight
|
public |
`SPOTlight`: Spatial Transcriptomics Deconvolution
|
2024-12-24 |
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bioconductor-fishpond
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public |
Fishpond: downstream methods and tools for expression data
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2024-12-24 |
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bioconductor-scdesign3
|
public |
A unified framework of realistic in silico data generation and statistical model inference for single-cell and spatial omics
|
2024-12-24 |
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bioconductor-trajectoryutils
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public |
Single-Cell Trajectory Analysis Utilities
|
2024-12-24 |
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bioconductor-cogaps
|
public |
Coordinated Gene Activity in Pattern Sets
|
2024-12-24 |
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bioconductor-vdjdive
|
public |
Analysis Tools for 10X V(D)J Data
|
2024-12-24 |
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bioconductor-screclassify
|
public |
scReClassify: post hoc cell type classification of single-cell RNA-seq data
|
2024-12-24 |
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bioconductor-treesummarizedexperiment
|
public |
TreeSummarizedExperiment: a S4 Class for Data with Tree Structures
|
2024-12-24 |
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bioconductor-hippo
|
public |
Heterogeneity-Induced Pre-Processing tOol
|
2024-12-24 |
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bioconductor-mast
|
public |
Model-based Analysis of Single Cell Transcriptomics
|
2024-12-24 |
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bioconductor-rcsl
|
public |
Rank Constrained Similarity Learning for single cell RNA sequencing data
|
2024-12-24 |
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bioconductor-sc3
|
public |
Single-Cell Consensus Clustering
|
2024-12-24 |
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bioconductor-clusterfoldsimilarity
|
public |
Calculate similarity of clusters from different single cell samples using foldchanges
|
2024-12-24 |
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bioconductor-schex
|
public |
Hexbin plots for single cell omics data
|
2024-12-24 |
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bioconductor-cdi
|
public |
Clustering Deviation Index (CDI)
|
2024-12-24 |
|
bioconductor-rgsepd
|
public |
Gene Set Enrichment / Projection Displays
|
2024-12-24 |
|
bioconductor-singlecellalleleexperiment
|
public |
S4 Class for Single Cell Data with Allele and Functional Levels for Immune Genes
|
2024-12-24 |
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bioconductor-curatedatlasqueryr
|
public |
Queries the Human Cell Atlas
|
2024-12-24 |
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bioconductor-smite
|
public |
Significance-based Modules Integrating the Transcriptome and Epigenome
|
2024-12-24 |
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bioconductor-scmet
|
public |
Bayesian modelling of cell-to-cell DNA methylation heterogeneity
|
2024-12-24 |
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bioconductor-asurat
|
public |
Functional annotation-driven unsupervised clustering for single-cell data
|
2024-12-24 |
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bioconductor-epimix
|
public |
EpiMix: an integrative tool for the population-level analysis of DNA methylation
|
2024-12-24 |
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bioconductor-clustifyr
|
public |
Classifier for Single-cell RNA-seq Using Cell Clusters
|
2024-12-24 |
|
bioconductor-epitxdb.sc.saccer3
|
public |
Annotation package for EpiTxDb objects
|
2024-12-24 |
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bioconductor-screpertoire
|
public |
A toolkit for single-cell immune receptor profiling
|
2024-12-24 |
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bioconductor-epitxdb.mm.mm10
|
public |
Annotation package for EpiTxDb objects
|
2024-12-24 |
|
bioconductor-scmap
|
public |
A tool for unsupervised projection of single cell RNA-seq data
|
2024-12-24 |
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bioconductor-epitxdb.hs.hg38
|
public |
Annotation package for EpiTxDb objects
|
2024-12-24 |
|
bioconductor-iloreg
|
public |
ILoReg: a tool for high-resolution cell population identification from scRNA-Seq data
|
2024-12-24 |
|
bioconductor-differentialregulation
|
public |
Differentially regulated genes from scRNA-seq data
|
2024-12-24 |
|
bioconductor-ggsc
|
public |
Visualizing Single Cell and Spatial Transcriptomics
|
2024-12-24 |
|
bioconductor-goseq
|
public |
Gene Ontology analyser for RNA-seq and other length biased data
|
2024-12-24 |
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bioconductor-adimpute
|
public |
Adaptive Dropout Imputer (ADImpute)
|
2024-12-24 |
|
bioconductor-dittoseq
|
public |
User Friendly Single-Cell and Bulk RNA Sequencing Visualization
|
2024-12-24 |
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bioconductor-scdataviz
|
public |
scDataviz: single cell dataviz and downstream analyses
|
2024-12-24 |
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bioconductor-nxtirfdata
|
public |
Data for NxtIRF
|
2024-12-24 |
