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bioconda / packages / bioconductor-nxtirfdata 1.8.0

Data for NxtIRF

Installers

  • noarch v1.8.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-nxtirfdata

Description

NxtIRFdata is a companion package for SpliceWiz, an interactive analysis and visualization tool for alternative splicing quantitation (including intron retention) for RNA-seq BAM files. NxtIRFdata contains Mappability files required for the generation of human and mouse references. NxtIRFdata also contains a synthetic genome reference and example BAM files used to demonstrate SpliceWiz's functionality. BAM files are based on 6 samples from the Leucegene dataset provided by NCBI Gene Expression Omnibus under accession number GSE67039.


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