bioconda / packages / bioconductor-rgsepd 1.26.0

Gene Set Enrichment / Projection Displays

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.12.0
  • osx-64  v1.12.0
  • noarch  v1.26.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-rgsepd
conda install -c bioconda/label/gcc7 bioconductor-rgsepd
conda install -c bioconda/label/cf201901 bioconductor-rgsepd

Description

R/GSEPD is a bioinformatics package for R to help disambiguate transcriptome samples (a matrix of RNA-Seq counts at transcript IDs) by automating differential expression (with DESeq2), then gene set enrichment (with GOSeq), and finally a N-dimensional projection to quantify in which ways each sample is like either treatment group.


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