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bioconda / packages / bioconductor-rgsepd 1.34.0

Gene Set Enrichment / Projection Displays

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.12.0
  • osx-64 v1.12.0
  • noarch v1.34.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-rgsepd
conda install bioconda/label/cf201901::bioconductor-rgsepd
conda install bioconda/label/gcc7::bioconductor-rgsepd

Description

R/GSEPD is a bioinformatics package for R to help disambiguate transcriptome samples (a matrix of RNA-Seq counts at transcript IDs) by automating differential expression (with DESeq2), then gene set enrichment (with GOSeq), and finally a N-dimensional projection to quantify in which ways each sample is like either treatment group.


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