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bioconda / packages / bioconductor-tidysinglecellexperiment 1.12.0

Brings SingleCellExperiment to the Tidyverse

Installers

  • noarch v1.12.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-tidysinglecellexperiment

Description

'tidySingleCellExperiment' is an adapter that abstracts the 'SingleCellExperiment' container in the form of a 'tibble'. This allows tidy data manipulation, nesting, and plotting. For example, a 'tidySingleCellExperiment' is directly compatible with functions from 'tidyverse' packages dplyr and tidyr, as well as plotting with ggplot2 and plotly. In addition, the package provides various utility functions specific to single-cell omics data analysis (e.g., aggregation of cell-level data to pseudobulks).


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