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bioconda / packages / bioconductor-screpertoire 2.2.0

A toolkit for single-cell immune receptor profiling

Installers

  • linux-64 v2.2.0
  • noarch v1.12.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-screpertoire

Description

scRepertoire is a toolkit for processing and analyzing single-cell T-cell receptor (TCR) and immunoglobulin (Ig). The scRepertoire framework supports use of 10x, AIRR, BD, MiXCR, Omniscope, TRUST4, and WAT3R single-cell formats. The functionality includes basic clonal analyses, repertoire summaries, distance-based clustering and interaction with the popular Seurat and SingleCellExperiment/Bioconductor R workflows.


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