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bioconductor-curatedatlasqueryr

Community

Queries the Human Cell Atlas

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-curatedatlasqueryr

Usage Tracking

1.4.0
1.0.0
2 / 8 versions selected
Total downloads: 0

Description

Provides access to a copy of the Human Cell Atlas, but with harmonised metadata. This allows for uniform querying across numerous datasets within the Atlas using common fields such as cell type, tissue type, and patient ethnicity. Usage involves first querying the metadata table for cells of interest, and then downloading the corresponding cells into a SingleCellExperiment object.

About

Summary

Queries the Human Cell Atlas

Information Last Updated

Apr 22, 2025 at 15:29

License

GPL-3

Total Downloads

906

Platforms

noarch Version: 1.4.0