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bioconda / packages / bioconductor-clusterfoldsimilarity 1.2.0

Calculate similarity of clusters from different single cell samples using foldchanges

Installers

  • noarch v1.2.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-clusterfoldsimilarity

Description

This package calculates a similarity coefficient using the fold changes of shared features (e.g. genes) among clusters of different samples/batches/datasets. The similarity coefficient is calculated using the dot-product (Hadamard product) of every pairwise combination of Fold Changes between a source cluster i of sample/dataset n and all the target clusters j in sample/dataset m


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