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bioconductor-screclassify

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scReClassify: post hoc cell type classification of single-cell RNA-seq data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-screclassify

Usage Tracking

1.12.0
1.8.0
1.6.0
1.4.0
1.0.0
5 / 8 versions selected
Total downloads: 0

Description

A post hoc cell type classification tool to fine-tune cell type annotations generated by any cell type classification procedure with semi-supervised learning algorithm AdaSampling technique. The current version of scReClassify supports Support Vector Machine and Random Forest as a base classifier.

About

Summary

scReClassify: post hoc cell type classification of single-cell RNA-seq data

Information Last Updated

Apr 22, 2025 at 15:29

License

GPL-3 + file LICENSE

Total Downloads

7.5K

Platforms

noarch Version: 1.12.0