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bioconductor-rcsl
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public |
Rank Constrained Similarity Learning for single cell RNA sequencing data
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2024-12-24 |
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bioconductor-sc3
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public |
Single-Cell Consensus Clustering
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2024-12-24 |
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bioconductor-clusterfoldsimilarity
|
public |
Calculate similarity of clusters from different single cell samples using foldchanges
|
2024-12-24 |
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bioconductor-schex
|
public |
Hexbin plots for single cell omics data
|
2024-12-24 |
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bioconductor-cdi
|
public |
Clustering Deviation Index (CDI)
|
2024-12-24 |
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bioconductor-rgsepd
|
public |
Gene Set Enrichment / Projection Displays
|
2024-12-24 |
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bioconductor-singlecellalleleexperiment
|
public |
S4 Class for Single Cell Data with Allele and Functional Levels for Immune Genes
|
2024-12-24 |
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bioconductor-curatedatlasqueryr
|
public |
Queries the Human Cell Atlas
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2024-12-24 |
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bioconductor-smite
|
public |
Significance-based Modules Integrating the Transcriptome and Epigenome
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2024-12-24 |
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bioconductor-scmet
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public |
Bayesian modelling of cell-to-cell DNA methylation heterogeneity
|
2024-12-24 |
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bioconductor-asurat
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public |
Functional annotation-driven unsupervised clustering for single-cell data
|
2024-12-24 |
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bioconductor-epimix
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public |
EpiMix: an integrative tool for the population-level analysis of DNA methylation
|
2024-12-24 |
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bioconductor-clustifyr
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public |
Classifier for Single-cell RNA-seq Using Cell Clusters
|
2024-12-24 |
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bioconductor-epitxdb.sc.saccer3
|
public |
Annotation package for EpiTxDb objects
|
2024-12-24 |
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bioconductor-screpertoire
|
public |
A toolkit for single-cell immune receptor profiling
|
2024-12-24 |
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bioconductor-epitxdb.mm.mm10
|
public |
Annotation package for EpiTxDb objects
|
2024-12-24 |
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bioconductor-scmap
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public |
A tool for unsupervised projection of single cell RNA-seq data
|
2024-12-24 |
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bioconductor-epitxdb.hs.hg38
|
public |
Annotation package for EpiTxDb objects
|
2024-12-24 |
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bioconductor-iloreg
|
public |
ILoReg: a tool for high-resolution cell population identification from scRNA-Seq data
|
2024-12-24 |
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bioconductor-differentialregulation
|
public |
Differentially regulated genes from scRNA-seq data
|
2024-12-24 |
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bioconductor-ggsc
|
public |
Visualizing Single Cell and Spatial Transcriptomics
|
2024-12-24 |
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bioconductor-goseq
|
public |
Gene Ontology analyser for RNA-seq and other length biased data
|
2024-12-24 |
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bioconductor-adimpute
|
public |
Adaptive Dropout Imputer (ADImpute)
|
2024-12-24 |
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bioconductor-dittoseq
|
public |
User Friendly Single-Cell and Bulk RNA Sequencing Visualization
|
2024-12-24 |
|
bioconductor-scdataviz
|
public |
scDataviz: single cell dataviz and downstream analyses
|
2024-12-24 |
|
bioconductor-nxtirfdata
|
public |
Data for NxtIRF
|
2024-12-24 |
|
bioconductor-isee
|
public |
Interactive SummarizedExperiment Explorer
|
2024-12-24 |
|
bioconductor-infercnv
|
public |
Infer Copy Number Variation from Single-Cell RNA-Seq Data
|
2024-12-24 |
|
bioconductor-probamr
|
public |
Generating SAM file for PSMs in shotgun proteomics data
|
2024-12-24 |
|
bioconductor-miqc
|
public |
Flexible, probabilistic metrics for quality control of scRNA-seq data
|
2024-12-24 |
|
bioconductor-loomexperiment
|
public |
LoomExperiment container
|
2024-12-24 |
|
bioconductor-epitxdb
|
public |
Storing and accessing epitranscriptomic information using the AnnotationDbi interface
|
2024-12-24 |
|
bioconductor-ccimpute
|
public |
ccImpute: an accurate and scalable consensus clustering based approach to impute dropout events in the single-cell RNA-seq data (https://doi.org/10.1186/s12859-022-04814-8)
|
2024-12-24 |
|
bioconductor-txcutr
|
public |
Transcriptome CUTteR
|
2024-12-24 |
|
bioconductor-baynorm
|
public |
Single-cell RNA sequencing data normalization
|
2024-12-24 |
|
bioconductor-sipsic
|
public |
Calculate Pathway Scores for Each Cell in scRNA-Seq Data
|
2024-12-24 |
|
bioconductor-outrider
|
public |
OUTRIDER - OUTlier in RNA-Seq fInDER
|
2024-12-24 |
|
bioconductor-scnorm
|
public |
Normalization of single cell RNA-seq data
|
2024-12-24 |
|
bioconductor-switchde
|
public |
Switch-like differential expression across single-cell trajectories
|
2024-12-24 |
|
bioconductor-recoup
|
public |
An R package for the creation of complex genomic profile plots
|
2024-12-24 |
|
bioconductor-busseq
|
public |
Batch Effect Correction with Unknow Subtypes for scRNA-seq data
|
2024-12-24 |
|
bioconductor-sitadela
|
public |
An R package for the easy provision of simple but complete tab-delimited genomic annotation from a variety of sources and organisms
|
2024-12-24 |
|
bioconductor-celltrails
|
public |
Reconstruction, visualization and analysis of branching trajectories
|
2024-12-24 |
|
bioconductor-organismdbi
|
public |
Software to enable the smooth interfacing of different database packages
|
2024-12-24 |
|
bioconductor-speckle
|
public |
Statistical methods for analysing single cell RNA-seq data
|
2024-12-24 |
|
bioconductor-proactiv
|
public |
Estimate Promoter Activity from RNA-Seq data
|
2024-12-24 |
|
bioconductor-crlmm
|
public |
Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays
|
2024-12-24 |
|
bioconductor-mbpcr
|
public |
Bayesian Piecewise Constant Regression for DNA copy number estimation
|
2024-12-24 |
|
bioconductor-genelendatabase
|
public |
Lengths of mRNA transcripts for a number of genomes
|
2024-12-24 |
|
bioconductor-omicade4
|
public |
Multiple co-inertia analysis of omics datasets
|
2024-12-24 |
