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bioconda / packages / bioconductor-recoup 1.30.0

An R package for the creation of complex genomic profile plots

Installers

Info: This package contains files in non-standard labels.
  • osx-64 v1.8.0
  • linux-64 v1.8.0
  • noarch v1.30.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-recoup
conda install bioconda/label/cf201901::bioconductor-recoup
conda install bioconda/label/gcc7::bioconductor-recoup

Description

recoup calculates and plots signal profiles created from short sequence reads derived from Next Generation Sequencing technologies. The profiles provided are either sumarized curve profiles or heatmap profiles. Currently, recoup supports genomic profile plots for reads derived from ChIP-Seq and RNA-Seq experiments. The package uses ggplot2 and ComplexHeatmap graphics facilities for curve and heatmap coverage profiles respectively.

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