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bioconductor-genefu
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public |
Computation of Gene Expression-Based Signatures in Breast Cancer
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2023-12-05 |
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bioconductor-netdx
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public |
Network-based patient classifier
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2023-12-05 |
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bioconductor-beadarraysnp
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public |
Normalization and reporting of Illumina SNP bead arrays
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2023-12-05 |
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bioconductor-iterclust
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public |
Iterative Clustering
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2023-12-05 |
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bioconductor-psea
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public |
Population-Specific Expression Analysis.
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2023-12-05 |
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bioconductor-metagenomeseq
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public |
Statistical analysis for sparse high-throughput sequencing
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2023-12-05 |
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bioconductor-antiprofilesdata
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public |
Normal colon and cancer preprocessed affy data for antiProfile building.
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2023-12-05 |
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bioconductor-pcxndata
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public |
Correlation coefficients and p values between pre-defined pathway/gene sets
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2023-12-05 |
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bioconductor-geneplast.data.string.v91
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public |
The package geneplast.data.string.v91 contains input data used in the analysis pipelines available in the geneplast package.
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2023-12-05 |
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olga
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public |
OLGA (Optimized Likelihood estimate of immunoGlobulin Amino-acid sequences) is a python 2.7/3.6 software developed to compute the generation probability of amino acid and in-frame nucleotide CDR3 sequences from a generative model of V(D)J recombination.
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2023-12-05 |
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bioconductor-curatedcrcdata
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public |
Colorectal Cancer Gene Expression Analysis
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2023-12-05 |
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bioconductor-msstatstmt
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public |
Protein Significance Analysis in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling
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2023-12-05 |
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phantasm
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public |
PHANTASM: PHylogenomic ANalyses for the TAxonomy and Systematics of Microbes
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2023-12-04 |
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bioconductor-biodbmirbase
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public |
biodbMirbase, a library for connecting to miRBase mature database
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2023-12-04 |
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bioconductor-biodbkegg
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public |
biodbKegg, a library for connecting to the KEGG Database
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2023-12-04 |
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bioconductor-biodblipidmaps
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public |
biodbLipidmaps, a library for connecting to the Lipidmaps Structure database
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2023-12-04 |
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bioconductor-biodbexpasy
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public |
biodbExpasy, a library for connecting to Expasy ENZYME database.
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2023-12-04 |
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bioconductor-gaggle
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public |
Broadcast data between R and Gaggle
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2023-12-04 |
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bioconductor-reactomegraph4r
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public |
Interface for the Reactome Graph Database
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2023-12-04 |
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bioconductor-gosummaries
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public |
Word cloud summaries of GO enrichment analysis
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2023-12-04 |
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bioconductor-lpeadj
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public |
A correction of the local pooled error (LPE) method to replace the asymptotic variance adjustment with an unbiased adjustment based on sample size.
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2023-12-04 |
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bioconductor-moda
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public |
MODA: MOdule Differential Analysis for weighted gene co-expression network
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2023-12-04 |
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bioconductor-ebseqhmm
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public |
Bayesian analysis for identifying gene or isoform expression changes in ordered RNA-seq experiments
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2023-12-04 |
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bioconductor-correp
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public |
Multivariate Correlation Estimator and Statistical Inference Procedures.
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2023-12-04 |
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bioconductor-summix
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public |
Summix: A method to estimate and adjust for population structure in genetic summary data
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2023-12-04 |
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bioconductor-smap
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public |
A Segmental Maximum A Posteriori Approach to Array-CGH Copy Number Profiling
|
2023-12-03 |
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bioconductor-paxtoolsr
|
public |
Access Pathways from Multiple Databases Through BioPAX and Pathway Commons
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2023-12-03 |
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bioconductor-squadd
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public |
Add-on of the SQUAD Software
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2023-12-03 |
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bioconductor-rdgidb
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public |
R Wrapper for DGIdb
|
2023-12-03 |
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bioconductor-reactomecontentservice4r
|
public |
Interface for the Reactome Content Service
|
2023-12-03 |
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bioconductor-panviz
|
public |
Integrating Multi-Omic Network Data With Summay-Level GWAS Data
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2023-12-03 |
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bioconductor-isanalytics
|
public |
Analyze gene therapy vector insertion sites data identified from genomics next generation sequencing reads for clonal tracking studies
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2023-12-03 |
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bioconductor-suprahex
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public |
supraHex: a supra-hexagonal map for analysing tabular omics data
|
2023-12-03 |
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bioconductor-mitch
|
public |
Multi-Contrast Gene Set Enrichment Analysis
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2023-12-03 |
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bioconductor-bhc
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public |
Bayesian Hierarchical Clustering
|
2023-12-03 |
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bioconductor-mqmetrics
|
public |
Quality Control of Protemics Data
|
2023-12-03 |
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bioconductor-typeinfo
|
public |
Optional Type Specification Prototype
|
2023-12-03 |
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shortseq
|
public |
\ ShortSeqs are compact and efficient Python objects that hold short sequences while using up to 73% less memory compared to built-in types. They have a pre-computed hash value, can be compared for equality, and are easily converted back to the original sequence string.
|
2023-12-03 |
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r-ramclustr
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public |
A feature clustering algorithm for non-targeted mass spectrometric metabolomics data. This method is compatible with gas and liquid chromatography coupled mass spectrometry, including indiscriminant tandem mass spectrometry data <DOI: 10.1021/ac501530d>.
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2023-12-02 |
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jass
|
public |
Computation of joint statistics over sets of GWAS results
|
2023-12-02 |
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lrsim
|
public |
Simulator for 10X Genomics Linked Reads
|
2023-12-02 |
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gotree
|
public |
gotree is a set of command line tools to manipulate phylogenetic trees
|
2023-11-29 |
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guidemaker
|
public |
GuideMaker: Software to design gRNAs pools in non-model genomes and CRISPR-Cas systems
|
2023-11-29 |
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jgoslin
|
public |
This project is a parser, validator and normalizer for shorthand lipid names, based on the Goslin project.
|
2023-11-28 |
|
visor
|
public |
Haplotype-aware structural variants simulator for short, long and linked reads
|
2023-11-28 |
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cstag-cli
|
public |
Command line interface of cstag to manipulate the minimap2's CS tag
|
2023-11-25 |
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gunc
|
public |
Python package for detection of chimerism and contamination in prokaryotic genomes.
|
2023-11-24 |
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anansnake
|
public |
Automated ANANSE analysis with seq2science & snakemake!
|
2023-11-23 |
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iphop
|
public |
Predict host genus from genomes of uncultivated phages.
|
2023-11-22 |
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gimmemotifs
|
public |
Motif prediction pipeline and various motif-related tools
|
2023-11-22 |
