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bioconductor-bhc

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Bayesian Hierarchical Clustering

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-bhc

Usage Tracking

1.54.0
1.52.0
1.50.0
1.46.0
1.44.0
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Total downloads: 0

Description

The method performs bottom-up hierarchical clustering, using a Dirichlet Process (infinite mixture) to model uncertainty in the data and Bayesian model selection to decide at each step which clusters to merge. This avoids several limitations of traditional methods, for example how many clusters there should be and how to choose a principled distance metric. This implementation accepts multinomial (i.e. discrete, with 2+ categories) or time-series data. This version also includes a randomised algorithm which is more efficient for larger data sets.

About

Summary

Bayesian Hierarchical Clustering

Information Last Updated

Apr 22, 2025 at 15:28

License

GPL-3

Total Downloads

49.0K

Platforms

Linux 64 Version: 1.54.0
macOS 64 Version: 1.54.0