bioconda / packages / bioconductor-pcxndata 2.19.0

Correlation coefficients and p values between pre-defined pathway/gene sets


Info: This package contains files in non-standard labels.
  • noarch v2.19.0

conda install

To install this package run one of the following:
conda install -c bioconda bioconductor-pcxndata
conda install -c "bioconda/label/gcc7" bioconductor-pcxndata


PCxN database contains correlation coefficients and p values between pre-defined gene sets within MSigDB H hallmark gene sets, MSigDB C2 CP (Canonical pathways), MSigDB C5 GO BP gene sets and Pathprint respectively, as well as adjusted pathway correlations to account for the shared genes between pathway pairs.

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