bioconda / packages / bioconductor-ebseqhmm 1.22.0

Bayesian analysis for identifying gene or isoform expression changes in ordered RNA-seq experiments

Installers

Info: This package contains files in non-standard labels.

conda install

  • noarch  v1.22.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-ebseqhmm
conda install -c bioconda/label/gcc7 bioconductor-ebseqhmm

Description

The EBSeqHMM package implements an auto-regressive hidden Markov model for statistical analysis in ordered RNA-seq experiments (e.g. time course or spatial course data). The EBSeqHMM package provides functions to identify genes and isoforms that have non-constant expression profile over the time points/positions, and cluster them into expression paths.

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