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bioconda / packages / bioconductor-lpeadj 1.62.0

A correction of the local pooled error (LPE) method to replace the asymptotic variance adjustment with an unbiased adjustment based on sample size.

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.40.0
  • osx-64 v1.40.0
  • noarch v1.62.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-lpeadj
conda install bioconda/label/cf201901::bioconductor-lpeadj
conda install bioconda/label/gcc7::bioconductor-lpeadj

Description

Two options are added to the LPE algorithm. The original LPE method sets all variances below the max variance in the ordered distribution of variances to the maximum variance. in LPEadj this option is turned off by default. The second option is to use a variance adjustment based on sample size rather than pi/2. By default the LPEadj uses the sample size based variance adjustment.


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