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bioconductor-summix

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Summix: A method to estimate and adjust for population structure in genetic summary data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-summix

Usage Tracking

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Description

This package contains the Summix method for estimating and adjusting for ancestry in genetic summary allele frequency data. The function summix estimates reference ancestry proportions using a mixture model. The adjAF function produces ancestry adjusted allele frequencies for an observed sample with ancestry proportions matching a target person or sample.

About

Summary

Summix: A method to estimate and adjust for population structure in genetic summary data

Last Updated

Dec 4, 2023 at 00:22

License

MIT + file LICENSE

Total Downloads

10.0K

Supported Platforms

noarch