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vcf2db
|
public |
Create a gemini-compatible database from a VCF
|
2024-01-10 |
|
vcfpy
|
public |
Python 3 VCF library with good support for both reading and writing
|
2024-01-10 |
|
mitgard
|
public |
Mitochondrial Genome Assembly from RNA-seq Data.
|
2024-01-08 |
|
harmony-pytorch
|
public |
This is a Pytorch implementation of Harmony algorithm on single-cell sequencing data integration.
|
2024-01-08 |
|
complexcgr
|
public |
Encoders and Image representation of DNA/RNA sequences based on the Chaos Game Representation of DNA
|
2024-01-07 |
|
vcfphasesets
|
public |
Get variants as phase sets from a VCF file using pysam.
|
2024-01-07 |
|
flight-genome
|
public |
flight - python component of Rosella and Lorikeet
|
2024-01-05 |
|
cannoli
|
public |
Distributed execution of bioinformatics tools on Apache Spark
|
2024-01-05 |
|
adam
|
public |
Genomics analysis platform built on Apache Avro, Apache Spark, and Apache Parquet
|
2024-01-05 |
|
antismash-lite
|
public |
antiSMASH - the antibiotics and Secondary Metabolite Analysis SHell
|
2023-12-30 |
|
nrpys
|
public |
Python language bindings for nrps-rs substrate specificity predictor.
|
2023-12-30 |
|
upimapi
|
public |
UniProt Id Mapping through API
|
2023-12-29 |
|
bioconductor-ccfindr
|
public |
Cancer Clone Finder
|
2023-12-26 |
|
bioconductor-singlecelltk
|
public |
Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data
|
2023-12-26 |
|
bioconductor-tbsignatureprofiler
|
public |
Profile RNA-Seq Data Using TB Pathway Signatures
|
2023-12-23 |
|
bioconductor-rmspc
|
public |
Multiple Sample Peak Calling
|
2023-12-22 |
|
bioconductor-rgmql
|
public |
GenoMetric Query Language for R/Bioconductor
|
2023-12-22 |
|
bioconductor-muscat
|
public |
Multi-sample multi-group scRNA-seq data analysis tools
|
2023-12-22 |
|
bioconductor-starbiotrek
|
public |
StarBioTrek
|
2023-12-22 |
|
bioconductor-brgenomics
|
public |
Tools for the Efficient Analysis of High-Resolution Genomics Data
|
2023-12-22 |
|
bioconductor-crisprbwa
|
public |
BWA-based alignment of CRISPR gRNA spacer sequences
|
2023-12-22 |
|
bioconductor-italics
|
public |
ITALICS
|
2023-12-22 |
|
bioconductor-tnbc.cms
|
public |
TNBC.CMS: Prediction of TNBC Consensus Molecular Subtypes
|
2023-12-22 |
|
bioconductor-apl
|
public |
Association Plots
|
2023-12-22 |
|
bioconductor-macarron
|
public |
Prioritization of potentially bioactive metabolic features from epidemiological and environmental metabolomics datasets
|
2023-12-22 |
|
bioconductor-rnainteractmapk
|
public |
Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi
|
2023-12-22 |
|
bioconductor-starank
|
public |
Stability Ranking
|
2023-12-22 |
|
bioconductor-rnainteract
|
public |
Estimate Pairwise Interactions from multidimensional features
|
2023-12-22 |
|
bioconductor-plogo2
|
public |
Plot Gene Ontology and KEGG pathway Annotation and Abundance
|
2023-12-22 |
|
bioconductor-adacgh2
|
public |
Analysis of big data from aCGH experiments using parallel computing and ff objects
|
2023-12-22 |
|
bioconductor-simbindprofiles
|
public |
Similar Binding Profiles
|
2023-12-22 |
|
bioconductor-cctutorial
|
public |
Data package for ChIP-chip tutorial
|
2023-12-22 |
|
bioconductor-bionetstat
|
public |
Biological Network Analysis
|
2023-12-22 |
|
bioconductor-snapcgh
|
public |
Segmentation, normalisation and processing of aCGH data
|
2023-12-22 |
|
bioconductor-gispa
|
public |
GISPA: Method for Gene Integrated Set Profile Analysis
|
2023-12-22 |
|
bioconductor-bnem
|
public |
Training of logical models from indirect measurements of perturbation experiments
|
2023-12-22 |
|
bioconductor-wppi
|
public |
Weighting protein-protein interactions
|
2023-12-22 |
|
bioconductor-props
|
public |
PRObabilistic Pathway Score (PROPS)
|
2023-12-22 |
|
bioconductor-pipecomp
|
public |
pipeComp pipeline benchmarking framework
|
2023-12-21 |
|
bioconductor-phemd
|
public |
Phenotypic EMD for comparison of single-cell samples
|
2023-12-21 |
|
bioconductor-scdblfinder
|
public |
scDblFinder
|
2023-12-21 |
|
bioconductor-gosim
|
public |
Computation of functional similarities between GO terms and gene products; GO enrichment analysis
|
2023-12-21 |
|
bioconductor-crossmeta
|
public |
Cross Platform Meta-Analysis of Microarray Data
|
2023-12-21 |
|
bioconductor-pareg
|
public |
Pathway enrichment using a regularized regression approach
|
2023-12-21 |
|
bioconductor-spidermir
|
public |
SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data
|
2023-12-21 |
|
bioconductor-omnipathr
|
public |
OmniPath web service client and more
|
2023-12-21 |
|
fiji-max_inscribed_circles
|
public |
ImageJ / Fiji plugin implementing an iterative Largest Inscribed Circle algorithm using a euclidean distance map
|
2023-12-21 |
|
snakemake-storage-plugin-http
|
public |
Snakemake storage plugin for donwloading input files from HTTP(s).
|
2023-12-20 |
|
snakemake-storage-plugin-sftp
|
public |
A Snakemake storage plugin that handles files on an SFTP server.
|
2023-12-20 |
|
snakemake-executor-plugin-azure-batch
|
public |
A Snakemake executor plugin for submitting jobs to Microsoft Azure Batch.
|
2023-12-20 |
