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bioconda / packages / bioconductor-pareg 1.6.0

Pathway enrichment using a regularized regression approach

Installers

  • noarch v1.6.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-pareg

Description

Compute pathway enrichment scores while accounting for term-term relations. This package uses a regularized multiple linear regression to regress differential expression p-values obtained from multi-condition experiments on a pathway membership matrix. By doing so, it is able to incorporate additional biological knowledge into the enrichment analysis and to estimate pathway enrichment scores more robustly.


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