| Package Name | Access | Summary | Updated |
|---|---|---|---|
| bioconductor-decontam | public | Identify Contaminants in Marker-gene and Metagenomics Sequencing Data | 2026-01-07 |
| bioconductor-iranges | public | Foundation of integer range manipulation in Bioconductor | 2026-01-07 |
| bioconductor-biocparallel | public | Bioconductor facilities for parallel evaluation | 2026-01-07 |
| bioconductor-s4vectors | public | Foundation of vector-like and list-like containers in Bioconductor | 2026-01-07 |
| bioconductor-biocgenerics | public | S4 generic functions used in Bioconductor | 2026-01-07 |
| primer3-py | public | Python bindings for Primer3. | 2026-01-07 |
| orthofinder | public | Accurate inference of orthogroups, orthologues, gene trees and rooted species tree made easy! | 2026-01-07 |
| planemo | public | Command-line utilities to assist in building tools for the Galaxy project (https://galaxyproject.org). | 2026-01-07 |
| diamond | public | Accelerated BLAST compatible local sequence aligner. | 2026-01-07 |
| perl-gd | public | Perl interface to the gd2 graphics library | 2026-01-06 |
| viennarna | public | ViennaRNA package -- RNA secondary structure prediction and comparison | 2026-01-03 |
| mlst | public | Scan contig files against PubMLST typing schemes | 2026-01-02 |
| snp-dists | public | Convert a FASTA alignment to SNP distance matrix. | 2025-12-31 |
| any2fasta | public | Convert various sequence formats to FASTA | 2025-12-30 |
| fastqe | public | A emoji based bioinformatics command line tool. | 2025-12-30 |
| picrust2 | public | PICRUSt: Phylogenetic Investigation of Communities by Reconstruction of Unobserved States | 2025-12-29 |
| hyphy | public | An open-source software package for comparative sequence analysis using stochastic evolutionary models. | 2025-12-26 |
| transit | public | TRANSIT | 2025-12-26 |
| perl-module-corelist | public | What modules shipped with versions of perl. | 2025-12-23 |
| biobb_io | public | Biobb_io is the Biobb module collection to fetch data to be consumed by the rest of the Biobb building blocks. | 2025-12-22 |
| biobb_model | public | Biobb_model is the Biobb module collection to check and model 3d structures, create mutations or reconstruct missing atoms. | 2025-12-22 |
| jcvi | public | Python utility libraries on genome assembly, annotation, and comparative genomics. | 2025-12-21 |
| seqkit | public | A cross-platform and ultrafast toolkit for FASTA/Q file manipulation. | 2025-12-20 |
| taxonkit | public | A Cross-platform and Efficient NCBI Taxonomy Toolkit | 2025-12-20 |
| poppunk | public | PopPUNK (POPulation Partitioning Using Nucleotide Kmers) | 2025-12-20 |
