bioconda / packages / bioconductor-badregionfinder 1.22.0

BadRegionFinder: an R/Bioconductor package for identifying regions with bad coverage

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.8.0
  • osx-64  v1.8.0
  • noarch  v1.22.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-badregionfinder
conda install -c bioconda/label/gcc7 bioconductor-badregionfinder
conda install -c bioconda/label/cf201901 bioconductor-badregionfinder

Description

BadRegionFinder is a package for identifying regions with a bad, acceptable and good coverage in sequence alignment data available as bam files. The whole genome may be considered as well as a set of target regions. Various visual and textual types of output are available.


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