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bioconda / packages / bioconductor-badregionfinder 1.30.0

BadRegionFinder: an R/Bioconductor package for identifying regions with bad coverage

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.8.0
  • osx-64 v1.8.0
  • noarch v1.30.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-badregionfinder
conda install bioconda/label/cf201901::bioconductor-badregionfinder
conda install bioconda/label/gcc7::bioconductor-badregionfinder

Description

BadRegionFinder is a package for identifying regions with a bad, acceptable and good coverage in sequence alignment data available as bam files. The whole genome may be considered as well as a set of target regions. Various visual and textual types of output are available.


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