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bioconda / packages / bioconductor-mineica 1.42.0

Analysis of an ICA decomposition obtained on genomics data

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.18.0
  • osx-64 v1.18.0
  • noarch v1.42.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-mineica
conda install bioconda/label/cf201901::bioconductor-mineica
conda install bioconda/label/gcc7::bioconductor-mineica

Description

The goal of MineICA is to perform Independent Component Analysis (ICA) on multiple transcriptome datasets, integrating additional data (e.g molecular, clinical and pathological). This Integrative ICA helps the biological interpretation of the components by studying their association with variables (e.g sample annotations) and gene sets, and enables the comparison of components from different datasets using correlation-based graph.


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