bioconda / packages / bioconductor-isoformswitchanalyzer 1.10.0

Identify, Annotate and Visualize Alternative Splicing and Isoform Switches with Functional Consequences from both short- and long-read RNA-seq data.


Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.10.0
  • osx-64  v1.10.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-isoformswitchanalyzer
conda install -c bioconda/label/gcc7 bioconductor-isoformswitchanalyzer
conda install -c bioconda/label/cf201901 bioconductor-isoformswitchanalyzer


IsoformSwitchAnalyzeR enables identification and analysis of alternative splicing and isoform switches with predicted functional consequences (e.g. gain/loss of protein domains etc.) from quantification of all types of RNASeq by tools such as Kallisto, Salmon, Cufflinks/Cuffdiff, RSEM etc.

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