Efficient phylogenetic analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. Calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format. Citation: Louca, Stilianos and Doebeli, Michael (2017) <doi:10.1093/bioinformatics/btx701>.

Type Size Name Uploaded Uploader Downloads Labels
conda 2.4 MB | win-64/r-castor-1.6.9-r41ha856d6a_0.tar.bz2  1 month and 11 days ago cf-staging 23 main
conda 2.5 MB | win-64/r-castor-1.6.9-r40ha856d6a_0.tar.bz2  1 month and 11 days ago cf-staging 28 main
conda 2.6 MB | osx-64/r-castor-1.6.9-r40h9951f98_0.tar.bz2  1 month and 11 days ago cf-staging 23 main
conda 2.6 MB | osx-64/r-castor-1.6.9-r41h9951f98_0.tar.bz2  1 month and 11 days ago cf-staging 20 main
conda 2.5 MB | linux-64/r-castor-1.6.9-r41h03ef668_0.tar.bz2  1 month and 11 days ago cf-staging 79 main
conda 2.5 MB | linux-64/r-castor-1.6.9-r40h03ef668_0.tar.bz2  1 month and 11 days ago cf-staging 83 main
conda 2.4 MB | win-64/r-castor-1.6.8-r40ha856d6a_0.tar.bz2  3 months and 6 days ago cf-staging 63 main
conda 2.3 MB | win-64/r-castor-1.6.8-r41ha856d6a_0.tar.bz2  3 months and 6 days ago cf-staging 65 main
conda 2.5 MB | osx-64/r-castor-1.6.8-r40h9951f98_0.tar.bz2  3 months and 6 days ago cf-staging 80 main
conda 2.4 MB | osx-64/r-castor-1.6.8-r41h9951f98_0.tar.bz2  3 months and 6 days ago cf-staging 60 main
conda 2.4 MB | linux-64/r-castor-1.6.8-r40h03ef668_0.tar.bz2  3 months and 6 days ago cf-staging 246 main
conda 2.3 MB | win-64/r-castor-1.6.7-r41ha856d6a_0.tar.bz2  4 months and 2 days ago cf-staging 92 main
conda 2.4 MB | osx-64/r-castor-1.6.7-r41h9951f98_0.tar.bz2  4 months and 2 days ago cf-staging 67 main
conda 2.4 MB | linux-64/r-castor-1.6.7-r41h03ef668_0.tar.bz2  4 months and 2 days ago cf-staging 215 main
conda 2.4 MB | win-64/r-castor-1.6.7-r36ha856d6a_0.tar.bz2  6 months and 16 days ago cf-staging 187 main
conda 2.4 MB | win-64/r-castor-1.6.7-r40ha856d6a_0.tar.bz2  6 months and 16 days ago cf-staging 195 main
conda 2.4 MB | osx-64/r-castor-1.6.7-r36h9951f98_0.tar.bz2  6 months and 16 days ago cf-staging 155 main
conda 2.4 MB | osx-64/r-castor-1.6.7-r40h9951f98_0.tar.bz2  6 months and 16 days ago cf-staging 181 main
conda 2.4 MB | linux-64/r-castor-1.6.7-r36h03ef668_0.tar.bz2  6 months and 16 days ago cf-staging 367 main
conda 2.4 MB | linux-64/r-castor-1.6.7-r40h03ef668_0.tar.bz2  6 months and 16 days ago cf-staging 427 main
conda 2.4 MB | win-64/r-castor-1.6.6-r40ha856d6a_0.tar.bz2  7 months and 7 days ago cf-staging 196 main
conda 2.4 MB | win-64/r-castor-1.6.6-r36ha856d6a_0.tar.bz2  7 months and 7 days ago cf-staging 192 main
conda 2.4 MB | osx-64/r-castor-1.6.6-r40h4efb63e_0.tar.bz2  7 months and 7 days ago cf-staging 175 main
conda 2.4 MB | osx-64/r-castor-1.6.6-r36h4efb63e_0.tar.bz2  7 months and 7 days ago cf-staging 169 main
conda 2.4 MB | linux-64/r-castor-1.6.6-r40h03ef668_0.tar.bz2  7 months and 7 days ago cf-staging 375 main
conda 2.4 MB | linux-64/r-castor-1.6.6-r36h03ef668_0.tar.bz2  7 months and 7 days ago cf-staging 360 main
conda 2.3 MB | win-64/r-castor-1.6.5-r40ha856d6a_0.tar.bz2  8 months and 21 days ago cf-staging 231 main
conda 2.3 MB | win-64/r-castor-1.6.5-r36ha856d6a_0.tar.bz2  8 months and 21 days ago cf-staging 233 main
conda 2.4 MB | osx-64/r-castor-1.6.5-r40h815b84a_0.tar.bz2  8 months and 21 days ago cf-staging 495 main
conda 2.4 MB | osx-64/r-castor-1.6.5-r36h815b84a_0.tar.bz2  8 months and 21 days ago cf-staging 180 main
conda 2.4 MB | linux-64/r-castor-1.6.5-r40h03ef668_0.tar.bz2  8 months and 21 days ago cf-staging 1629 main
conda 2.4 MB | linux-64/r-castor-1.6.5-r36h03ef668_0.tar.bz2  8 months and 21 days ago cf-staging 424 main
conda 2.1 MB | win-64/r-castor-1.6.4-r36h096a1c2_0.tar.bz2  11 months and 20 hours ago cf-staging 268 main
conda 2.1 MB | win-64/r-castor-1.6.4-r40h096a1c2_0.tar.bz2  11 months and 20 hours ago cf-staging 256 main
conda 2.2 MB | osx-64/r-castor-1.6.4-r40h342fd00_0.tar.bz2  11 months and 20 hours ago cf-staging 217 main
conda 2.2 MB | osx-64/r-castor-1.6.4-r36h342fd00_0.tar.bz2  11 months and 20 hours ago cf-staging 200 main
conda 2.1 MB | linux-64/r-castor-1.6.4-r40h1b71b39_0.tar.bz2  11 months and 20 hours ago cf-staging 559 main
conda 2.1 MB | linux-64/r-castor-1.6.4-r36h1b71b39_0.tar.bz2  11 months and 20 hours ago cf-staging 533 main
conda 2.0 MB | win-64/r-castor-1.6.3-r40h796a38f_0.tar.bz2  1 year and 1 month ago cf-staging 314 main
conda 2.0 MB | win-64/r-castor-1.6.3-r36h796a38f_0.tar.bz2  1 year and 1 month ago cf-staging 321 main
conda 2.1 MB | osx-64/r-castor-1.6.3-r40h710217c_0.tar.bz2  1 year and 1 month ago cf-staging 266 main
conda 2.0 MB | osx-64/r-castor-1.6.3-r36h710217c_0.tar.bz2  1 year and 1 month ago cf-staging 264 main
conda 2.0 MB | linux-64/r-castor-1.6.3-r40h0357c0b_0.tar.bz2  1 year and 1 month ago cf-staging 650 main
conda 2.0 MB | linux-64/r-castor-1.6.3-r36h0357c0b_0.tar.bz2  1 year and 1 month ago cf-staging 638 main
conda 2.1 MB | win-64/r-castor-1.6.2-r36h796a38f_0.tar.bz2  1 year and 2 months ago cf-staging 313 main
conda 2.1 MB | win-64/r-castor-1.6.2-r40h796a38f_0.tar.bz2  1 year and 2 months ago cf-staging 322 main
conda 2.0 MB | osx-64/r-castor-1.6.2-r40h710217c_0.tar.bz2  1 year and 2 months ago cf-staging 265 main
conda 2.1 MB | osx-64/r-castor-1.6.2-r36h710217c_0.tar.bz2  1 year and 2 months ago cf-staging 268 main
conda 2.0 MB | linux-64/r-castor-1.6.2-r36h0357c0b_0.tar.bz2  1 year and 2 months ago cf-staging 854 main
conda 2.0 MB | linux-64/r-castor-1.6.2-r40h0357c0b_0.tar.bz2  1 year and 2 months ago cf-staging 848 main

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