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Efficient phylogenetic analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. Calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format. Citation: Louca, Stilianos and Doebeli, Michael (2017) <doi:10.1093/bioinformatics/btx701>.

copied from cf-staging / r-castor
Type Size Name Uploaded Downloads Labels
conda 2.4 MB | win-64/r-castor-1.8.3-r43h8ae3a7c_0.conda  7 months and 8 days ago 318 main
conda 2.5 MB | win-64/r-castor-1.8.3-r44h8ae3a7c_0.conda  7 months and 8 days ago 265 main
conda 2.6 MB | osx-64/r-castor-1.8.3-r44h2711daa_0.conda  7 months and 8 days ago 479 main
conda 2.6 MB | osx-64/r-castor-1.8.3-r43h2711daa_0.conda  7 months and 8 days ago 224 main
conda 2.5 MB | linux-64/r-castor-1.8.3-r43h93ab643_0.conda  7 months and 8 days ago 1406 main
conda 2.6 MB | linux-64/r-castor-1.8.3-r44h93ab643_0.conda  7 months and 8 days ago 2986 main
conda 2.5 MB | win-64/r-castor-1.8.2-r44h8ae3a7c_1.conda  11 months and 18 hours ago 278 main
conda 2.4 MB | win-64/r-castor-1.8.2-r43h8ae3a7c_1.conda  11 months and 18 hours ago 295 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r44h25d921d_1.conda  11 months and 18 hours ago 342 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r43h25d921d_1.conda  11 months and 18 hours ago 319 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r43h0d4f4ea_1.conda  11 months and 18 hours ago 1574 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r44h0d4f4ea_1.conda  11 months and 18 hours ago 1940 main
conda 2.4 MB | win-64/r-castor-1.8.2-r41he75b88d_0.conda  11 months and 27 days ago 303 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r42h25d921d_0.conda  11 months and 27 days ago 287 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r43h25d921d_0.conda  11 months and 27 days ago 268 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r43ha18555a_0.conda  11 months and 27 days ago 1428 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r42ha18555a_0.conda  11 months and 27 days ago 1674 main
conda 2.4 MB | win-64/r-castor-1.8.0-r41ha856d6a_0.conda  1 year and 5 months ago 292 main
conda 2.6 MB | osx-64/r-castor-1.8.0-r43h29979af_0.conda  1 year and 5 months ago 401 main
conda 2.6 MB | osx-64/r-castor-1.8.0-r42h29979af_0.conda  1 year and 5 months ago 416 main
conda 2.5 MB | linux-64/r-castor-1.8.0-r42ha503ecb_0.conda  1 year and 5 months ago 2039 main
conda 2.5 MB | linux-64/r-castor-1.8.0-r43ha503ecb_0.conda  1 year and 5 months ago 2573 main
conda 2.4 MB | win-64/r-castor-1.7.11-r41ha856d6a_0.conda  1 year and 10 months ago 412 main
conda 2.6 MB | osx-64/r-castor-1.7.11-r43hac7d2d5_0.conda  1 year and 10 months ago 363 main
conda 2.6 MB | osx-64/r-castor-1.7.11-r42hac7d2d5_0.conda  1 year and 10 months ago 388 main

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