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Efficient phylogenetic analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. Calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format. Citation: Louca, Stilianos and Doebeli, Michael (2017) <doi:10.1093/bioinformatics/btx701>.

copied from cf-staging / r-castor
Type Size Name Uploaded Downloads Labels
conda 2.4 MB | win-64/r-castor-1.8.3-r43h8ae3a7c_0.conda  6 months and 16 days ago 312 main
conda 2.5 MB | win-64/r-castor-1.8.3-r44h8ae3a7c_0.conda  6 months and 16 days ago 260 main
conda 2.6 MB | osx-64/r-castor-1.8.3-r44h2711daa_0.conda  6 months and 16 days ago 432 main
conda 2.6 MB | osx-64/r-castor-1.8.3-r43h2711daa_0.conda  6 months and 16 days ago 211 main
conda 2.5 MB | linux-64/r-castor-1.8.3-r43h93ab643_0.conda  6 months and 16 days ago 1292 main
conda 2.6 MB | linux-64/r-castor-1.8.3-r44h93ab643_0.conda  6 months and 16 days ago 2676 main
conda 2.5 MB | win-64/r-castor-1.8.2-r44h8ae3a7c_1.conda  10 months and 9 days ago 273 main
conda 2.4 MB | win-64/r-castor-1.8.2-r43h8ae3a7c_1.conda  10 months and 9 days ago 289 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r44h25d921d_1.conda  10 months and 9 days ago 337 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r43h25d921d_1.conda  10 months and 9 days ago 314 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r43h0d4f4ea_1.conda  10 months and 9 days ago 1517 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r44h0d4f4ea_1.conda  10 months and 9 days ago 1882 main
conda 2.4 MB | win-64/r-castor-1.8.2-r41he75b88d_0.conda  11 months and 5 days ago 300 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r42h25d921d_0.conda  11 months and 5 days ago 280 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r43h25d921d_0.conda  11 months and 5 days ago 263 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r43ha18555a_0.conda  11 months and 5 days ago 1378 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r42ha18555a_0.conda  11 months and 5 days ago 1585 main
conda 2.4 MB | win-64/r-castor-1.8.0-r41ha856d6a_0.conda  1 year and 4 months ago 287 main
conda 2.6 MB | osx-64/r-castor-1.8.0-r43h29979af_0.conda  1 year and 4 months ago 397 main
conda 2.6 MB | osx-64/r-castor-1.8.0-r42h29979af_0.conda  1 year and 4 months ago 412 main
conda 2.5 MB | linux-64/r-castor-1.8.0-r42ha503ecb_0.conda  1 year and 4 months ago 1984 main
conda 2.5 MB | linux-64/r-castor-1.8.0-r43ha503ecb_0.conda  1 year and 4 months ago 2520 main
conda 2.4 MB | win-64/r-castor-1.7.11-r41ha856d6a_0.conda  1 year and 9 months ago 408 main
conda 2.6 MB | osx-64/r-castor-1.7.11-r43hac7d2d5_0.conda  1 year and 9 months ago 361 main
conda 2.6 MB | osx-64/r-castor-1.7.11-r42hac7d2d5_0.conda  1 year and 9 months ago 385 main

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