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Efficient phylogenetic analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. Calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format. Citation: Louca, Stilianos and Doebeli, Michael (2017) <doi:10.1093/bioinformatics/btx701>.

copied from cf-post-staging / r-castor
Type Size Name Uploaded Downloads Labels
conda 1.6 MB | win-64/r-castor-1.5.5-r35h796a38f_0.tar.bz2  5 years and 8 months ago 1113 main cf202003
conda 1.6 MB | win-64/r-castor-1.5.5-r36h796a38f_0.tar.bz2  5 years and 8 months ago 1144 main cf202003
conda 1.7 MB | osx-64/r-castor-1.5.5-r35hc5da6b9_0.tar.bz2  5 years and 8 months ago 364 main cf202003
conda 1.7 MB | osx-64/r-castor-1.5.5-r36hc5da6b9_0.tar.bz2  5 years and 8 months ago 362 main cf202003
conda 1.6 MB | linux-64/r-castor-1.5.5-r36h0357c0b_0.tar.bz2  5 years and 8 months ago 3856 main cf202003
conda 1.6 MB | linux-64/r-castor-1.5.5-r35h0357c0b_0.tar.bz2  5 years and 8 months ago 3876 main cf202003
conda 1.6 MB | win-64/r-castor-1.5.3-r36h796a38f_0.tar.bz2  5 years and 9 months ago 1137 main cf202003
conda 1.6 MB | win-64/r-castor-1.5.3-r35h796a38f_0.tar.bz2  5 years and 9 months ago 1163 main cf202003
conda 1.7 MB | osx-64/r-castor-1.5.3-r35hc5da6b9_0.tar.bz2  5 years and 9 months ago 447 main cf202003
conda 1.7 MB | osx-64/r-castor-1.5.3-r36hc5da6b9_0.tar.bz2  5 years and 9 months ago 364 main cf202003
conda 1.6 MB | linux-64/r-castor-1.5.3-r35h0357c0b_0.tar.bz2  5 years and 9 months ago 3899 main cf202003
conda 1.6 MB | linux-64/r-castor-1.5.3-r36h0357c0b_0.tar.bz2  5 years and 9 months ago 3925 main cf202003
conda 1.4 MB | win-64/r-castor-1.5.0-r35h796a38f_0.tar.bz2  5 years and 11 months ago 1246 main cf202003
conda 1.4 MB | win-64/r-castor-1.5.0-r36h796a38f_0.tar.bz2  5 years and 11 months ago 1278 main cf202003
conda 1.5 MB | osx-64/r-castor-1.5.0-r36hc5da6b9_0.tar.bz2  5 years and 11 months ago 1081 main cf202003
conda 1.4 MB | linux-64/r-castor-1.5.0-r36h0357c0b_0.tar.bz2  5 years and 11 months ago 6768 main cf202003
conda 1.4 MB | linux-64/r-castor-1.5.0-r35h0357c0b_0.tar.bz2  5 years and 11 months ago 5309 main cf202003
conda 1.3 MB | win-64/r-castor-1.4.3-r35h796a38f_0.tar.bz2  6 years and 2 days ago 1300 main cf202003
conda 1.3 MB | win-64/r-castor-1.4.3-r36h796a38f_0.tar.bz2  6 years and 2 days ago 1302 main cf202003
conda 1.3 MB | osx-64/r-castor-1.4.3-r35hc5da6b9_0.tar.bz2  6 years and 2 days ago 356 main cf202003
conda 1.3 MB | osx-64/r-castor-1.4.3-r36hc5da6b9_0.tar.bz2  6 years and 2 days ago 368 main cf202003
conda 1.2 MB | linux-64/r-castor-1.4.3-r35h0357c0b_0.tar.bz2  6 years and 2 days ago 4114 main cf202003
conda 1.2 MB | win-64/r-castor-1.4.2-r36h796a38f_0.tar.bz2  6 years and 1 month ago 1376 main cf202003
conda 1.2 MB | win-64/r-castor-1.4.2-r35h796a38f_0.tar.bz2  6 years and 1 month ago 1344 main cf202003
conda 1.2 MB | osx-64/r-castor-1.4.2-r36hf99fc2c_0.tar.bz2  6 years and 1 month ago 375 main cf202003

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