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Efficient phylogenetic analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. Calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format. Citation: Louca, Stilianos and Doebeli, Michael (2017) <doi:10.1093/bioinformatics/btx701>.

copied from cf-post-staging / r-castor
Type Size Name Uploaded Downloads Labels
conda 2.5 MB | win-64/r-castor-1.8.4-r43hd8a2815_0.conda  16 hours and 55 minutes ago 14 main
conda 2.6 MB | win-64/r-castor-1.8.4-r44hd8a2815_0.conda  16 hours and 56 minutes ago 15 main
conda 2.6 MB | osx-64/r-castor-1.8.4-r43h813e631_0.conda  16 hours and 56 minutes ago 16 main
conda 2.7 MB | osx-64/r-castor-1.8.4-r44h813e631_0.conda  16 hours and 57 minutes ago 16 main
conda 2.6 MB | linux-64/r-castor-1.8.4-r44h3697838_0.conda  16 hours and 59 minutes ago 36 main
conda 2.6 MB | linux-64/r-castor-1.8.4-r43h3697838_0.conda  17 hours and a few seconds ago 26 main
conda 2.4 MB | win-64/r-castor-1.8.3-r43h8ae3a7c_0.conda  9 months and 7 days ago 328 main
conda 2.5 MB | win-64/r-castor-1.8.3-r44h8ae3a7c_0.conda  9 months and 7 days ago 274 main
conda 2.6 MB | osx-64/r-castor-1.8.3-r44h2711daa_0.conda  9 months and 7 days ago 576 main
conda 2.6 MB | osx-64/r-castor-1.8.3-r43h2711daa_0.conda  9 months and 7 days ago 257 main
conda 2.5 MB | linux-64/r-castor-1.8.3-r43h93ab643_0.conda  9 months and 7 days ago 1691 main
conda 2.6 MB | linux-64/r-castor-1.8.3-r44h93ab643_0.conda  9 months and 7 days ago 3801 main
conda 2.5 MB | win-64/r-castor-1.8.2-r44h8ae3a7c_1.conda  1 year and 1 month ago 285 main
conda 2.4 MB | win-64/r-castor-1.8.2-r43h8ae3a7c_1.conda  1 year and 1 month ago 302 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r44h25d921d_1.conda  1 year and 1 month ago 347 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r43h25d921d_1.conda  1 year and 1 month ago 325 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r43h0d4f4ea_1.conda  1 year and 1 month ago 1736 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r44h0d4f4ea_1.conda  1 year and 1 month ago 2057 main
conda 2.4 MB | win-64/r-castor-1.8.2-r41he75b88d_0.conda  1 year and 1 month ago 315 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r42h25d921d_0.conda  1 year and 1 month ago 300 main
conda 2.6 MB | osx-64/r-castor-1.8.2-r43h25d921d_0.conda  1 year and 1 month ago 275 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r43ha18555a_0.conda  1 year and 1 month ago 1548 main
conda 2.5 MB | linux-64/r-castor-1.8.2-r42ha18555a_0.conda  1 year and 1 month ago 1835 main
conda 2.4 MB | win-64/r-castor-1.8.0-r41ha856d6a_0.conda  1 year and 7 months ago 296 main
conda 2.6 MB | osx-64/r-castor-1.8.0-r43h29979af_0.conda  1 year and 7 months ago 405 main

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