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bioconductor-tpp2d
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public |
Detection of ligand-protein interactions from 2D thermal profiles (DLPTP)
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2024-12-15 |
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vadr
|
public |
Viral Annotation DefineR - classification and annotation of viral sequences based on RefSeq annotation
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2024-12-15 |
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nohuman
|
public |
Remove human reads from a sequencing run
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2024-12-15 |
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bioconductor-decoupler
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public |
decoupleR: Ensemble of computational methods to infer biological activities from omics data
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2024-12-15 |
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bioconductor-biodb
|
public |
biodb, a library and a development framework for connecting to chemical and biological databases
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2024-12-15 |
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bioconductor-mixomics
|
public |
Omics Data Integration Project
|
2024-12-15 |
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phyloacc
|
public |
Bayesian estimation of substitution rate shifts in non-coding regions
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2024-12-15 |
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bioconductor-magrene
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public |
Motif Analysis In Gene Regulatory Networks
|
2024-12-15 |
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bioconductor-brendadb
|
public |
The BRENDA Enzyme Database
|
2024-12-15 |
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bioconductor-pengls
|
public |
Fit Penalised Generalised Least Squares models
|
2024-12-15 |
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bioconductor-abseqr
|
public |
Reporting and data analysis functionalities for Rep-Seq datasets of antibody libraries
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2024-12-15 |
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metabinkit
|
public |
Set of programs to perform taxonomic binning.
|
2024-12-15 |
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repeatscout
|
public |
De novo identification of repeat families in large genomes.
|
2024-12-15 |
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bioconductor-scfa
|
public |
SCFA: Subtyping via Consensus Factor Analysis
|
2024-12-15 |
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hs-blastn
|
public |
hs-blastn, a fast and accurate nucleotide-nucleotide sequences aligner.
|
2024-12-14 |
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bioconductor-cytoglmm
|
public |
Conditional Differential Analysis for Flow and Mass Cytometry Experiments
|
2024-12-14 |
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localhgt
|
public |
Tools for dealing with SAM, BAM and CRAM files
|
2024-12-14 |
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bioconductor-synlet
|
public |
Hits Selection for Synthetic Lethal RNAi Screen Data
|
2024-12-14 |
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perl-par-packer
|
public |
No Summary
|
2024-12-14 |
|
bioconductor-desingle
|
public |
DEsingle for detecting three types of differential expression in single-cell RNA-seq data
|
2024-12-14 |
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bioconductor-compass
|
public |
Combinatorial Polyfunctionality Analysis of Single Cells
|
2024-12-14 |
|
bioconductor-nparc
|
public |
Non-parametric analysis of response curves for thermal proteome profiling experiments
|
2024-12-14 |
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pytrimal
|
public |
Cython bindings and Python interface to trimAl, a tool for automated alignment trimming.
|
2024-12-14 |
|
psascan
|
public |
A parallel external memory suffix array construction algorithm
|
2024-12-14 |
|
bioconductor-kinswingr
|
public |
KinSwingR: network-based kinase activity prediction
|
2024-12-14 |
|
bioconductor-mbcb
|
public |
MBCB (Model-based Background Correction for Beadarray)
|
2024-12-14 |
|
pyopal
|
public |
Cython bindings and Python interface to Opal, a SIMD-accelerated pairwise aligner.
|
2024-12-14 |
|
nextpolish
|
public |
Fast and accurately polish the genome generated by long reads
|
2024-12-14 |
|
bioconductor-ctsge
|
public |
Clustering of Time Series Gene Expression data
|
2024-12-14 |
|
andi
|
public |
Efficient Estimation of Evolutionary Distances
|
2024-12-14 |
|
bitmapperbs
|
public |
BitMapperBS: a fast and accurate read aligner for whole-genome bisulfite sequencing
|
2024-12-14 |
|
bioconductor-absseq
|
public |
ABSSeq: a new RNA-Seq analysis method based on modelling absolute expression differences
|
2024-12-14 |
|
genericrepeatfinder
|
public |
Generic Repeat Finder (GRF).
|
2024-12-14 |
|
r-scbio
|
public |
Cellular population mapping (CPM) a deconvolution algorithm in which single-cell genomics is required in only one or a few samples, where in other samples of the same tissue, only bulk genomics is measured and the underlying fine resolution cellular heterogeneity is inferred.
|
2024-12-14 |
|
bioconductor-oppti
|
public |
Outlier Protein and Phosphosite Target Identifier
|
2024-12-14 |
|
bioconductor-qubic
|
public |
An R package for qualitative biclustering in support of gene co-expression analyses
|
2024-12-14 |
|
r-pscbs
|
public |
Segmentation of allele-specific DNA copy number data and detection of regions with abnormal copy number within each parental chromosome. Both tumor-normal paired and tumor-only analyses are supported.
|
2024-12-14 |
|
r-metama
|
public |
Combines either p-values or modified effect sizes from different studies to find differentially expressed genes
|
2024-12-14 |
|
bioconductor-minet
|
public |
Mutual Information NETworks
|
2024-12-14 |
|
cycle_finder
|
public |
A de novo analysis tool for tandem and interspersed repeats based on cycle-finding
|
2024-12-14 |
|
bioconductor-deqms
|
public |
a tool to perform statistical analysis of differential protein expression for quantitative proteomics data.
|
2024-12-14 |
|
greenhill
|
public |
A de novo chromosomal-level scaffolding and phasing tool using Hi-C
|
2024-12-14 |
|
provean
|
public |
PROVEAN (Protein Variation Effect Analyzer) is a software tool which predicts whether an amino acid substitution or indel has an impact on the biological function of a protein.
|
2024-12-14 |
|
bioconductor-marray
|
public |
Exploratory analysis for two-color spotted microarray data
|
2024-12-14 |
|
fec
|
public |
An error correction tool
|
2024-12-14 |
|
r-mkmisc
|
public |
Contains several functions for statistical data analysis; e.g. for sample size and power calculations, computation of confidence intervals and tests, and generation of similarity matrices.
|
2024-12-14 |
|
bioconductor-alphamissenser
|
public |
Accessing AlphaMissense Data Resources in R
|
2024-12-14 |
|
bioconductor-ichip
|
public |
Bayesian Modeling of ChIP-chip Data Through Hidden Ising Models
|
2024-12-14 |
|
bioconductor-methylmix
|
public |
MethylMix: Identifying methylation driven cancer genes
|
2024-12-14 |
|
bioconductor-limmagui
|
public |
GUI for limma Package With Two Color Microarrays
|
2024-12-14 |
