bioconductor-alphamissenser
Accessing AlphaMissense Data Resources in R
Accessing AlphaMissense Data Resources in R
To install this package, run one of the following:
The AlphaMissense publication https://www.science.org/doi/epdf/10.1126/science.adg7492 outlines how a variant of AlphaFold / DeepMind was used to predict missense variant pathogenicity. Supporting data on Zenodo https://zenodo.org/record/10813168 include, for instance, 71M variants across hg19 and hg38 genome builds. The 'AlphaMissenseR' package allows ready access to the data, downloading individual files to DuckDB databases for exploration and integration into R and Bioconductor workflows.
Summary
Accessing AlphaMissense Data Resources in R
Information Last Updated
Apr 22, 2025 at 15:29
License
Artistic-2.0
Total Downloads
397
Platforms