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bioconductor-alphamissenser

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Accessing AlphaMissense Data Resources in R

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-alphamissenser

Usage Tracking

1.2.0
1 / 8 versions selected
Total downloads: 0

Description

The AlphaMissense publication https://www.science.org/doi/epdf/10.1126/science.adg7492 outlines how a variant of AlphaFold / DeepMind was used to predict missense variant pathogenicity. Supporting data on Zenodo https://zenodo.org/record/10813168 include, for instance, 71M variants across hg19 and hg38 genome builds. The 'AlphaMissenseR' package allows ready access to the data, downloading individual files to DuckDB databases for exploration and integration into R and Bioconductor workflows.

About

Summary

Accessing AlphaMissense Data Resources in R

Information Last Updated

Apr 22, 2025 at 15:29

License

Artistic-2.0

Total Downloads

397

Platforms

noarch Version: 1.2.0