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bioconductor-mirnatap.db
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public |
This package holds the database for miRNAtap.
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2025-04-22 |
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bioconductor-gtrellis
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public |
Genome Level Trellis Layout
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2025-04-22 |
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bioconductor-mutationalpatterns
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public |
Comprehensive genome-wide analysis of mutational processes
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2025-04-22 |
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r-maldirppa
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public |
Provides methods for quality control and robust pre-processing and analysis of MALDI mass spectrometry data.
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2025-04-22 |
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r-metama
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public |
Combines either p-values or modified effect sizes from different studies to find differentially expressed genes
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2025-04-22 |
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bioconductor-flowbeads
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public |
flowBeads: Analysis of flow bead data
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2025-04-22 |
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bioconductor-bsseq
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public |
Analyze, manage and store whole-genome methylation data
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2025-04-22 |
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bioconductor-isoformswitchanalyzer
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public |
Identify, Annotate and Visualize Isoform Switches with Functional Consequences from both short- and long-read RNA-seq data
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2025-04-22 |
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bioconductor-drimseq
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public |
Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seq
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2025-04-22 |
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bioconductor-affyplm
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public |
Methods for fitting probe-level models
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2025-04-22 |
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bioconductor-htsfilter
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public |
Filter replicated high-throughput transcriptome sequencing data
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2025-04-22 |
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bioconductor-recount
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public |
Explore and download data from the recount project
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2025-04-22 |
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bioconductor-flagme
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public |
Analysis of Metabolomics GC/MS Data
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2025-04-22 |
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bioconductor-snplocs.hsapiens.dbsnp144.grch38
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public |
SNP locations and alleles for Homo sapiens extracted from NCBI dbSNP Build 144. The source data files used for this package were created by NCBI on May 30, 2015, and contain SNPs mapped to reference genome GRCh38.p2 (a patched version of GRCh38 that doesn't alter chromosomes 1-22, X, Y, MT). Note that these SNPs can be "injected" in BSgenome.Hsapiens.NCBI.GRCh38 or in BSgenome.Hsapiens.UCSC.hg38.
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2025-04-22 |
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bioconductor-splatter
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public |
Simple Simulation of Single-cell RNA Sequencing Data
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2025-04-22 |
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r-gkmsvm
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public |
Imports the 'gkmSVM' v2.0 functionalities into R <http://www.beerlab.org/gkmsvm/> It also uses the 'kernlab' library (separate R package by different authors) for various SVM algorithms.
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2025-04-22 |
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bioconductor-derfinderplot
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public |
Plotting functions for derfinder
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2025-04-22 |
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bioconductor-egsea
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public |
Ensemble of Gene Set Enrichment Analyses
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2025-04-22 |
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bioconductor-egseadata
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public |
Gene set collections for the EGSEA package
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2025-04-22 |
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bioconductor-padog
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public |
Pathway Analysis with Down-weighting of Overlapping Genes (PADOG)
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2025-04-22 |
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bioconductor-hgu133plus2.db
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public |
Affymetrix Affymetrix HG-U133_Plus_2 Array annotation data (chip hgu133plus2)
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2025-04-22 |
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bioconductor-hgu133a.db
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public |
Affymetrix Affymetrix HG-U133A Array annotation data (chip hgu133a)
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2025-04-22 |
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bioconductor-glimma
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public |
Interactive visualizations for gene expression analysis
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2025-04-22 |
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bioconductor-keggdzpathwaysgeo
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public |
KEGG Disease Datasets from GEO
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2025-04-22 |
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bioconductor-scpipe
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public |
Pipeline for single cell multi-omic data pre-processing
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2025-04-22 |
