bioconda / packages / bioconductor-drimseq 1.16.0

Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seq

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.8.0
  • osx-64  v1.8.0
  • noarch  v1.16.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-drimseq
conda install -c bioconda/label/gcc7 bioconductor-drimseq
conda install -c bioconda/label/cf201901 bioconductor-drimseq

Description

The package provides two frameworks. One for the differential transcript usage analysis between different conditions and one for the tuQTL analysis. Both are based on modeling the counts of genomic features (i.e., transcripts) with the Dirichlet-multinomial distribution. The package also makes available functions for visualization and exploration of the data and results.

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