bioconda / packages / bioconductor-padog 1.30.0

Pathway Analysis with Down-weighting of Overlapping Genes (PADOG)

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.22.0
  • osx-64  v1.22.0
  • noarch  v1.30.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-padog
conda install -c bioconda/label/gcc7 bioconductor-padog
conda install -c bioconda/label/cf201901 bioconductor-padog

Description

This package implements a general purpose gene set analysis method called PADOG that downplays the importance of genes that apear often accross the sets of genes to be analyzed. The package provides also a benchmark for gene set analysis methods in terms of sensitivity and ranking using 24 public datasets from KEGGdzPathwaysGEO package.

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