bioconda / packages / bioconductor-scpipe 1.16.0

pipeline for single cell RNA-seq data analysis


Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.16.0
  • osx-64  v1.16.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-scpipe
conda install -c bioconda/label/gcc7 bioconductor-scpipe
conda install -c bioconda/label/cf201901 bioconductor-scpipe


A preprocessing pipeline for single cell RNA-seq data that starts from the fastq files and produces a gene count matrix with associated quality control information. It can process fastq data generated by CEL-seq, MARS-seq, Drop-seq, Chromium 10x and SMART-seq protocols.

© 2022 Anaconda, Inc. All Rights Reserved. (v2.36.2 a8848f00) Legal | Privacy Policy