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bioconductor-chopsticks
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public |
The 'snp.matrix' and 'X.snp.matrix' Classes
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2025-04-22 |
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bioconductor-cleanupdtseq
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public |
cleanUpdTSeq cleans up artifacts from polyadenylation sites from oligo(dT)-mediated 3' end RNA sequending data
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2025-04-22 |
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bioconductor-cghnormaliter
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public |
Normalization of array CGH data with imbalanced aberrations.
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2025-04-22 |
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bioconductor-icobra
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public |
Comparison and Visualization of Ranking and Assignment Methods
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2025-04-22 |
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bioconductor-ichip
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public |
Bayesian Modeling of ChIP-chip Data Through Hidden Ising Models
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2025-04-22 |
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bioconductor-bsgenome.drerio.ucsc.danrer7
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public |
Full genome sequences for Danio rerio (Zebrafish) as provided by UCSC (danRer7, Jul. 2010) and stored in Biostrings objects.
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2025-04-22 |
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bioconductor-clstutils
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public |
Tools for performing taxonomic assignment
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2025-04-22 |
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bioconductor-ibh
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public |
Interaction Based Homogeneity for Evaluating Gene Lists
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2025-04-22 |
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bioconductor-clonotyper
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public |
High throughput analysis of T cell antigen receptor sequences
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2025-04-22 |
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bioconductor-clst
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public |
Classification by local similarity threshold
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2025-04-22 |
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bioconductor-simpintlists
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public |
The package contains BioGRID interactions for various organisms in a simple format
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2025-04-22 |
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bioconductor-iaseq
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public |
iASeq: integrating multiple sequencing datasets for detecting allele-specific events
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2025-04-22 |
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bioconductor-bufferedmatrixmethods
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public |
Microarray Data related methods that utlize BufferedMatrix objects
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2025-04-22 |
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bioconductor-cancerinsilico
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public |
An R interface for computational modeling of tumor progression
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2025-04-22 |
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bioconductor-bus
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public |
Gene network reconstruction
|
2025-04-22 |
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bioconductor-bufferedmatrix
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public |
A matrix data storage object held in temporary files
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2025-04-22 |
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bioconductor-browserviz
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public |
BrowserViz: interactive R/browser graphics using websockets and JSON
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2025-04-22 |
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bioconductor-birewire
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public |
High-performing routines for the randomization of a bipartite graph (or a binary event matrix), undirected and directed signed graph preserving degree distribution (or marginal totals)
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2025-04-22 |
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bioconductor-bridge
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public |
Bayesian Robust Inference for Differential Gene Expression
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2025-04-22 |
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bioconductor-bioqc
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public |
Detect tissue heterogeneity in expression profiles with gene sets
|
2025-04-22 |
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bioconductor-biosvd
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public |
Package for high-throughput data processing, outlier detection, noise removal and dynamic modeling
|
2025-04-22 |
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bioconductor-hopach
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public |
Hierarchical Ordered Partitioning and Collapsing Hybrid (HOPACH)
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2025-04-22 |
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bioconductor-biomvcclass
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public |
Model-View-Controller (MVC) Classes That Use Biobase
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2025-04-22 |
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bioconductor-hybridmtest
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public |
Hybrid Multiple Testing
|
2025-04-22 |
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bioconductor-htseqtools
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public |
We provide efficient, easy-to-use tools for High-Throughput Sequencing (ChIP-seq, RNAseq etc.). These include MDS plots (analogues to PCA), detecting inefficient immuno-precipitation or over-amplification artifacts, tools to identify and test for genomic regions with large accumulation of reads, and visualization of coverage profiles.
|
2025-04-22 |
