bioconda / packages / bioconductor-simpintlists 1.33.0

The package contains BioGRID interactions for various organisms in a simple format

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.16.0
  • osx-64 v1.16.0
  • noarch v1.33.0

conda install

To install this package run one of the following:
conda install -c bioconda bioconductor-simpintlists
conda install -c "bioconda/label/cf201901" bioconductor-simpintlists
conda install -c "bioconda/label/gcc7" bioconductor-simpintlists

Description

The package contains BioGRID interactions for arabidopsis(thale cress), c.elegans, fruit fly, human, mouse, yeast( budding yeast ) and S.pombe (fission yeast) . Entrez ids, official names and unique ids can be used to find proteins. The format of interactions are lists. For each gene/protein, there is an entry in the list with "name" containing name of the gene/protein and "interactors" containing the list of genes/proteins interacting with it.


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