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bioconda / packages / bioconductor-bioqc 1.30.0

Detect tissue heterogeneity in expression profiles with gene sets

Installers

Info: This package contains files in non-standard labels.
  • linux-aarch64 v1.30.0
  • linux-64 v1.30.0
  • osx-64 v1.30.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-bioqc
conda install bioconda/label/cf201901::bioconductor-bioqc
conda install bioconda/label/gcc7::bioconductor-bioqc

Description

BioQC performs quality control of high-throughput expression data based on tissue gene signatures. It can detect tissue heterogeneity in gene expression data. The core algorithm is a Wilcoxon-Mann-Whitney test that is optimised for high performance.


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