bioconda / packages / bioconductor-clonotyper 1.26.0

High throughput analysis of T cell antigen receptor sequences

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.18.0
  • osx-64  v1.18.0
  • noarch  v1.26.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-clonotyper
conda install -c bioconda/label/gcc7 bioconductor-clonotyper
conda install -c bioconda/label/cf201901 bioconductor-clonotyper

Description

High throughput analysis of T cell antigen receptor sequences The genes encoding T cell receptors are created by somatic recombination, generating an immense combination of V, (D) and J segments. Additional processes during the recombination create extra sequence diversity between the V an J segments. Collectively, this hyper-variable region is called the CDR3 loop. The purpose of this package is to process and quantitatively analyse millions of V-CDR3-J combination, called clonotypes, from multiple sequence libraries.

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