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bioconductor-beachmat
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public |
Compiling Bioconductor to Handle Each Matrix Type
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2025-04-22 |
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bioconductor-hdf5array
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public |
HDF5 datasets as array-like objects in R
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2025-04-22 |
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bioconductor-flowrepositoryr
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public |
FlowRepository R Interface
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2025-04-22 |
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bioconductor-gcspikelite
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public |
Spike-in data for GC/MS data and methods within flagme
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2025-04-22 |
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bioconductor-genvisr
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public |
Genomic Visualizations in R
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2025-04-22 |
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bioconductor-fishalyser
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public |
FISHalyseR a package for automated FISH quantification
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2025-04-22 |
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bioconductor-blima
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public |
Tools for the preprocessing and analysis of the Illumina microarrays on the detector (bead) level
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2025-04-22 |
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bioconductor-bitseq
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public |
Transcript expression inference and differential expression analysis for RNA-seq data
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2025-04-22 |
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bioconductor-birte
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public |
Expression levels of mRNA molecules are regulated by different processes, comprising inhibition or activation by transcription factors and post-transcriptional degradation by microRNAs. biRte uses regulatory networks of TFs, miRNAs and possibly other factors, together with mRNA, miRNA and other available expression data to predict the relative influence of a regulator on the expression of its target genes. Inference is done in a Bayesian modeling framework using Markov-Chain-Monte-Carlo. A special feature is the possibility for follow-up network reverse engineering between active regulators.
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2025-04-22 |
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bioconductor-birta
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public |
Bayesian Inference of Regulation of Transcriptional Activity
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2025-04-22 |
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bioconductor-biodist
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public |
Different distance measures
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2025-04-22 |
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bioconductor-beaddatapackr
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public |
Compression of Illumina BeadArray data
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2025-04-22 |
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bioconductor-badregionfinder
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public |
BadRegionFinder: an R/Bioconductor package for identifying regions with bad coverage
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2025-04-22 |
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bioconductor-bac
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public |
Bayesian Analysis of Chip-chip experiment
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2025-04-22 |
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bioconductor-agilp
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public |
Agilent expression array processing package
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2025-04-22 |
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bioconductor-affyrnadegradation
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public |
Analyze and correct probe positional bias in microarray data due to RNA degradation
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2025-04-22 |
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bioconductor-affyilm
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public |
Linear Model of background subtraction and the Langmuir isotherm
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2025-04-22 |
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bioconductor-genomicinteractions
|
public |
Utilities for handling genomic interaction data
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2025-04-22 |
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bioconductor-affycontam
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public |
structured corruption of affymetrix cel file data
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2025-04-22 |
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bioconductor-affycompatible
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public |
Affymetrix GeneChip software compatibility
|
2025-04-22 |
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bioconductor-genominator
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public |
Analyze, manage and store genomic data
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2025-04-22 |
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bioconductor-interactionset
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public |
Base Classes for Storing Genomic Interaction Data
|
2025-04-22 |
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bioconductor-genomegraphs
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public |
Plotting genomic information from Ensembl
|
2025-04-22 |
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bioconductor-genomictuples
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public |
Representation and Manipulation of Genomic Tuples
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2025-04-22 |
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bioconductor-derfinderhelper
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public |
derfinder helper package
|
2025-04-22 |
