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bioconda / packages / bioconductor-affyrnadegradation 1.48.0

Analyze and correct probe positional bias in microarray data due to RNA degradation

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.26.0
  • osx-64 v1.26.0
  • noarch v1.48.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-affyrnadegradation
conda install bioconda/label/cf201901::bioconductor-affyrnadegradation
conda install bioconda/label/gcc7::bioconductor-affyrnadegradation

Description

The package helps with the assessment and correction of RNA degradation effects in Affymetrix 3' expression arrays. The parameter d gives a robust and accurate measure of RNA integrity. The correction removes the probe positional bias, and thus improves comparability of samples that are affected by RNA degradation.


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