| Package Name | Access | Summary | Updated |
|---|---|---|---|
| bioconductor-snpchip | public | Visualizations for copy number alterations | 2025-04-22 |
| bioconductor-lumi | public | BeadArray Specific Methods for Illumina Methylation and Expression Microarrays | 2025-04-22 |
| bioconductor-altcdfenvs | public | alternative CDF environments (aka probeset mappings) | 2025-04-22 |
| bioconductor-derfinder | public | Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution via the DER Finder approach | 2025-04-22 |
| bioconductor-chimera | public | A package for secondary analysis of fusion products | 2025-04-22 |
| bioconductor-hypergraph | public | A package providing hypergraph data structures | 2025-04-22 |
| bioconductor-genbankr | public | Parsing GenBank files into semantically useful objects | 2025-04-22 |
| bioconductor-genomicfiles | public | Distributed computing by file or by range | 2025-04-22 |
| r-vcfr | public | Facilitates easy manipulation of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices of data. This information can then be used for quality control or other purposes. Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file (*.vcf.gz). It also may be converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF data and familiar R software. | 2025-04-22 |
| bioconductor-homo.sapiens | public | Contains the Homo.sapiens object to access data from several related annotation packages. | 2025-04-22 |
| bioconductor-lmgene | public | LMGene Software for Data Transformation and Identification of Differentially Expressed Genes in Gene Expression Arrays | 2025-04-22 |
| bioconductor-cytolib | public | C++ infrastructure for representing and interacting with the gated cytometry data | 2025-04-22 |
| bioconductor-imagehts | public | Analysis of high-throughput microscopy-based screens | 2025-04-22 |
| bioconductor-ideoviz | public | Plots data (continuous/discrete) along chromosomal ideogram | 2025-04-22 |
| bioconductor-idiogram | public | idiogram | 2025-04-22 |
| bioconductor-hiannotator | public | Functions for annotating GRanges objects | 2025-04-22 |
| bioconductor-bladderbatch | public | Bladder gene expression data illustrating batch effects | 2025-04-22 |
| bioconductor-flowpeaks | public | An R package for flow data clustering | 2025-04-22 |
| bioconductor-flowmap | public | Mapping cell populations in flow cytometry data for cross-sample comparisons using the Friedman-Rafsky Test | 2025-04-22 |
| bioconductor-flowclean | public | flowClean | 2025-04-22 |
| bioconductor-frma | public | Frozen RMA and Barcode | 2025-04-22 |
| bioconductor-frmatools | public | Frozen RMA Tools | 2025-04-22 |
| bioconductor-fccac | public | functional Canonical Correlation Analysis to evaluate Covariance between nucleic acid sequencing datasets | 2025-04-22 |
| bioconductor-rprotobuflib | public | C++ headers and static libraries of Protocol buffers | 2025-04-22 |
| bioconductor-genemeta | public | MetaAnalysis for High Throughput Experiments | 2025-04-22 |
