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bioconda / packages / bioconductor-hdf5array 1.30.0

HDF5 backend for DelayedArray objects

Installers

Info: This package contains files in non-standard labels.
  • linux-aarch64 v1.30.0
  • linux-64 v1.30.0
  • osx-64 v1.30.0
  • noarch v1.10.1

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-hdf5array
conda install bioconda/label/broken::bioconductor-hdf5array
conda install bioconda/label/cf201901::bioconductor-hdf5array
conda install bioconda/label/gcc7::bioconductor-hdf5array

Description

Implement the HDF5Array, H5SparseMatrix, H5ADMatrix, and TENxMatrix classes, 4 convenient and memory-efficient array-like containers for representing and manipulating either: (1) a conventional (a.k.a. dense) HDF5 dataset, (2) an HDF5 sparse matrix (stored in CSR/CSC/Yale format), (3) the central matrix of an h5ad file (or any matrix in the /layers group), or (4) a 10x Genomics sparse matrix. All these containers are DelayedArray extensions and thus support all operations (delayed or block-processed) supported by DelayedArray objects.


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