| Package Name | Access | Summary | Updated |
|---|---|---|---|
| bioconductor-rchemcpp | public | The Rchemcpp package implements the marginalized graph kernel and extensions, Tanimoto kernels, graph kernels, pharmacophore and 3D kernels suggested for measuring the similarity of molecules. | 2025-04-22 |
| bioconductor-singlecellexperiment | public | S4 Classes for Single Cell Data | 2025-04-22 |
| bioconductor-rbiopaxparser | public | Parses BioPax files and represents them in R | 2025-04-22 |
| bioconductor-chemminer | public | Cheminformatics Toolkit for R | 2025-04-22 |
| bioconductor-semisup | public | Semi-Supervised Mixture Model | 2025-04-22 |
| bioconductor-fithic | public | Confidence estimation for intra-chromosomal contact maps | 2025-04-22 |
| bioconductor-farms | public | FARMS - Factor Analysis for Robust Microarray Summarization | 2025-04-22 |
| bioconductor-cnanorm | public | A normalization method for Copy Number Aberration in cancer samples | 2025-04-22 |
| bioconductor-clonality | public | Clonality testing | 2025-04-22 |
| bioconductor-clomial | public | Infers clonal composition of a tumor | 2025-04-22 |
| bioconductor-wiggleplotr | public | Make read coverage plots from BigWig files | 2025-04-22 |
| bioconductor-raggedexperiment | public | Representation of Sparse Experiments and Assays Across Samples | 2025-04-22 |
| bioconductor-somaticsignatures | public | Somatic Signatures | 2025-04-22 |
| bioconductor-netreg | public | Network-Regularized Regression Models | 2025-04-22 |
| bioconductor-chromdraw | public | chromDraw is a R package for drawing the schemes of karyotypes in the linear and circular fashion. | 2025-04-22 |
| bioconductor-cleaver | public | Cleavage of Polypeptide Sequences | 2025-04-22 |
| bioconductor-chromplot | public | Global visualization tool of genomic data | 2025-04-22 |
| bioconductor-arrayexpress | public | Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet | 2025-04-22 |
| bioconductor-ioniser | public | Quality Assessment Tools for Oxford Nanopore MinION data | 2025-04-22 |
| bioconductor-rcy3 | public | Functions to Access and Control Cytoscape | 2025-04-22 |
| bioconductor-banocc | public | Bayesian ANalysis Of Compositional Covariance | 2025-04-22 |
| r-swamp | public | Collection of functions to connect the structure of the data with the information on the samples. Three types of associations are covered: 1. linear model of principal components. 2. hierarchical clustering analysis. 3. distribution of features-sample annotation associations. Additionally, the inter-relation between sample annotations can be analyzed. Simple methods are provided for the correction of batch effects and removal of principal components. | 2025-04-22 |
| bioconductor-phosphonormalizer | public | Compensates for the bias introduced by median normalization in | 2025-04-22 |
| bioconductor-ndexr | public | NDEx R client library | 2025-04-22 |
| bioconductor-multiomicsviz | public | Plot the effect of one omics data on other omics data along the chromosome | 2025-04-22 |
