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Facilitates easy manipulation of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices of data. This information can then be used for quality control or other purposes. Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file (*.vcf.gz). It also may be converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF data and familiar R software.

copied from cf-staging / r-vcfr
Type Size Name Uploaded Downloads Labels
conda 1.7 MB | win-64/r-vcfr-1.15.0-r43hee0745d_1.conda  7 months and 12 days ago 485 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r44hee0745d_1.conda  7 months and 12 days ago 482 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r44hfba2881_1.conda  7 months and 12 days ago 413 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r43hfba2881_1.conda  7 months and 12 days ago 458 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r43h92ba465_1.conda  7 months and 12 days ago 1315 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r44h92ba465_1.conda  7 months and 12 days ago 1188 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r41h67098fc_0.conda  1 year and 2 months ago 594 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r42hd6ad0b9_0.conda  1 year and 2 months ago 491 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r43hd6ad0b9_0.conda  1 year and 2 months ago 537 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r43h33b523d_0.conda  1 year and 2 months ago 2127 main
conda 1.6 MB | linux-64/r-vcfr-1.15.0-r42h33b523d_0.conda  1 year and 2 months ago 1746 main

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