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Facilitates easy manipulation of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices of data. This information can then be used for quality control or other purposes. Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file (*.vcf.gz). It also may be converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF data and familiar R software.

copied from cf-staging / r-vcfr
Type Size Name Uploaded Downloads Labels
conda 1.7 MB | win-64/r-vcfr-1.15.0-r43hee0745d_1.conda  8 months and 8 days ago 488 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r44hee0745d_1.conda  8 months and 8 days ago 489 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r44hfba2881_1.conda  8 months and 8 days ago 422 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r43hfba2881_1.conda  8 months and 8 days ago 462 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r43h92ba465_1.conda  8 months and 8 days ago 1398 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r44h92ba465_1.conda  8 months and 8 days ago 1286 main
conda 1.7 MB | win-64/r-vcfr-1.15.0-r41h67098fc_0.conda  1 year and 3 months ago 595 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r42hd6ad0b9_0.conda  1 year and 3 months ago 493 main
conda 1.6 MB | osx-64/r-vcfr-1.15.0-r43hd6ad0b9_0.conda  1 year and 3 months ago 539 main
conda 1.7 MB | linux-64/r-vcfr-1.15.0-r43h33b523d_0.conda  1 year and 3 months ago 2189 main
conda 1.6 MB | linux-64/r-vcfr-1.15.0-r42h33b523d_0.conda  1 year and 3 months ago 1806 main
conda 1.7 MB | win-64/r-vcfr-1.14.0-r41h67098fc_1.conda  1 year and 9 months ago 695 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r43ha73a074_1.conda  1 year and 9 months ago 485 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r42ha73a074_1.conda  1 year and 9 months ago 449 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r43h33b523d_1.conda  1 year and 9 months ago 1889 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r42h33b523d_1.conda  1 year and 9 months ago 1807 main
conda 1.7 MB | win-64/r-vcfr-1.14.0-r41h67098fc_0.conda  2 years and 1 month ago 863 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r41h32f0767_0.conda  2 years and 1 month ago 465 main
conda 1.6 MB | osx-64/r-vcfr-1.14.0-r42h32f0767_0.conda  2 years and 1 month ago 454 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r41h58bca29_0.conda  2 years and 1 month ago 2654 main
conda 1.7 MB | linux-64/r-vcfr-1.14.0-r42h58bca29_0.conda  2 years and 1 month ago 2146 main
conda 1.5 MB | win-64/r-vcfr-1.13.0-r41h67098fc_1.tar.bz2  2 years and 5 months ago 531 main
conda 1.5 MB | osx-64/r-vcfr-1.13.0-r41h32f0767_1.tar.bz2  2 years and 5 months ago 75 main
conda 1.5 MB | osx-64/r-vcfr-1.13.0-r42h32f0767_1.tar.bz2  2 years and 5 months ago 81 main
conda 1.5 MB | linux-64/r-vcfr-1.13.0-r41h690469d_1.tar.bz2  2 years and 5 months ago 1989 main

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