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A toolkit for working with Biological Observation Matrix ('BIOM') files. Features include reading/writing all 'BIOM' formats, rarefaction, alpha diversity, beta diversity (including 'UniFrac'), summarizing counts by taxonomic level, and sample subsetting. Standalone functions for reading, writing, and subsetting phylogenetic trees are also provided. All CPU intensive operations are encoded in C with multi-thread support.

copied from cf-post-staging / r-rbiom
Type Size Name Uploaded Downloads Labels
conda 1.6 MB | osx-arm64/r-rbiom-2.2.1-r45hc1cd577_1.conda  12 days and 10 hours ago 19 main
conda 1.6 MB | osx-arm64/r-rbiom-2.2.1-r44hc1cd577_1.conda  12 days and 10 hours ago 28 main
conda 1.6 MB | osx-64/r-rbiom-2.2.1-r44ha730edb_1.conda  12 days and 10 hours ago 23 main
conda 1.6 MB | osx-64/r-rbiom-2.2.1-r45ha730edb_1.conda  12 days and 10 hours ago 27 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.1-r44h08b74da_1.conda  12 days and 10 hours ago 30 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.2.1-r44hb6fba7b_1.conda  12 days and 10 hours ago 10 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.1-r45h08b74da_1.conda  12 days and 10 hours ago 28 main
conda 1.6 MB | linux-64/r-rbiom-2.2.1-r44h3697838_1.conda  12 days and 10 hours ago 250 main
conda 1.6 MB | linux-64/r-rbiom-2.2.1-r45h3697838_1.conda  12 days and 10 hours ago 71 main
conda 1.5 MB | osx-arm64/r-rbiom-2.2.1-r43h31118f2_0.conda  3 months and 10 days ago 38 main
conda 1.5 MB | osx-64/r-rbiom-2.2.1-r43h2711daa_0.conda  3 months and 10 days ago 42 main
conda 1.6 MB | osx-arm64/r-rbiom-2.2.1-r44h31118f2_0.conda  3 months and 10 days ago 98 main
conda 1.6 MB | osx-64/r-rbiom-2.2.1-r44h2711daa_0.conda  3 months and 10 days ago 68 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.2.1-r44h8455397_0.conda  3 months and 10 days ago 24 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.1-r44h21d2c02_0.conda  3 months and 10 days ago 79 main
conda 1.5 MB | linux-aarch64/r-rbiom-2.2.1-r43h21d2c02_0.conda  3 months and 10 days ago 53 main
conda 1.5 MB | linux-ppc64le/r-rbiom-2.2.1-r43h8455397_0.conda  3 months and 10 days ago 26 main
conda 1.5 MB | linux-64/r-rbiom-2.2.1-r43h93ab643_0.conda  3 months and 10 days ago 587 main
conda 1.6 MB | linux-64/r-rbiom-2.2.1-r44h93ab643_0.conda  3 months and 10 days ago 1660 main

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