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A toolkit for working with Biological Observation Matrix ('BIOM') files. Features include reading/writing all 'BIOM' formats, rarefaction, alpha diversity, beta diversity (including 'UniFrac'), summarizing counts by taxonomic level, and sample subsetting. Standalone functions for reading, writing, and subsetting phylogenetic trees are also provided. All CPU intensive operations are encoded in C with multi-thread support.

copied from cf-post-staging / r-rbiom
Type Size Name Uploaded Downloads Labels
conda 1.5 MB | osx-arm64/r-rbiom-2.2.1-r43h31118f2_0.conda  2 months and 1 day ago 28 main
conda 1.5 MB | osx-64/r-rbiom-2.2.1-r43h2711daa_0.conda  2 months and 1 day ago 30 main
conda 1.6 MB | osx-arm64/r-rbiom-2.2.1-r44h31118f2_0.conda  2 months and 1 day ago 57 main
conda 1.6 MB | osx-64/r-rbiom-2.2.1-r44h2711daa_0.conda  2 months and 1 day ago 49 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.2.1-r44h8455397_0.conda  2 months and 1 day ago 18 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.1-r44h21d2c02_0.conda  2 months and 1 day ago 54 main
conda 1.5 MB | linux-aarch64/r-rbiom-2.2.1-r43h21d2c02_0.conda  2 months and 1 day ago 37 main
conda 1.5 MB | linux-ppc64le/r-rbiom-2.2.1-r43h8455397_0.conda  2 months and 1 day ago 17 main
conda 1.5 MB | linux-64/r-rbiom-2.2.1-r43h93ab643_0.conda  2 months and 1 day ago 377 main
conda 1.6 MB | linux-64/r-rbiom-2.2.1-r44h93ab643_0.conda  2 months and 1 day ago 1151 main
conda 1.6 MB | osx-64/r-rbiom-2.2.0-r44h2711daa_0.conda  4 months and 24 days ago 66 main
conda 1.6 MB | osx-arm64/r-rbiom-2.2.0-r43h31118f2_0.conda  4 months and 24 days ago 40 main
conda 1.6 MB | osx-arm64/r-rbiom-2.2.0-r44h31118f2_0.conda  4 months and 24 days ago 42 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.0-r43h21d2c02_0.conda  4 months and 24 days ago 42 main
conda 1.6 MB | osx-64/r-rbiom-2.2.0-r43h2711daa_0.conda  4 months and 24 days ago 43 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.2.0-r44h8455397_0.conda  4 months and 24 days ago 24 main
conda 1.6 MB | linux-ppc64le/r-rbiom-2.2.0-r43h8455397_0.conda  4 months and 24 days ago 23 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.2.0-r44h21d2c02_0.conda  4 months and 24 days ago 61 main
conda 1.6 MB | linux-64/r-rbiom-2.2.0-r44h93ab643_0.conda  4 months and 24 days ago 1611 main
conda 1.6 MB | linux-64/r-rbiom-2.2.0-r43h93ab643_0.conda  4 months and 24 days ago 685 main
conda 1.6 MB | osx-arm64/r-rbiom-2.1.2-r44h31118f2_0.conda  5 months and 9 days ago 42 main
conda 1.6 MB | linux-aarch64/r-rbiom-2.1.2-r44h21d2c02_0.conda  5 months and 9 days ago 38 main
conda 1.6 MB | osx-64/r-rbiom-2.1.2-r43h2711daa_0.conda  5 months and 9 days ago 101 main
conda 1.6 MB | osx-arm64/r-rbiom-2.1.2-r43h31118f2_0.conda  5 months and 9 days ago 36 main
conda 1.6 MB | osx-64/r-rbiom-2.1.2-r44h2711daa_0.conda  5 months and 9 days ago 46 main

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