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conda-forge / packages / r-preseqr

Originally as an R version of Preseq <doi:10.1038/nmeth.2375>, the package has extended its functionality to predict the r-species accumulation curve (r-SAC), which is the number of species represented at least r times as a function of the sampling effort. When r = 1, the curve is known as the species accumulation curve, or the library complexity curve in high-throughput genomic sequencing. The package includes both parametric and nonparametric methods, as described by Deng C, et al. (2018) <arXiv:1607.02804v3>.

copied from cf-staging / r-preseqr

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Type Size Name Uploaded Downloads Labels
conda 239.3 kB | noarch/r-preseqr-4.0.0-r43hc72bb7e_1005.conda  8 months and 25 days ago 782 main
conda 242.2 kB | noarch/r-preseqr-4.0.0-r44hc72bb7e_1005.conda  8 months and 25 days ago 708 main
conda 239.1 kB | noarch/r-preseqr-4.0.0-r43hc72bb7e_1004.conda  1 year and 9 months ago 1445 main
conda 239.3 kB | noarch/r-preseqr-4.0.0-r42hc72bb7e_1004.conda  1 year and 9 months ago 1129 main
conda 243.8 kB | noarch/r-preseqr-4.0.0-r41hc72bb7e_1003.tar.bz2  2 years and 5 months ago 1514 main
conda 244.0 kB | noarch/r-preseqr-4.0.0-r42hc72bb7e_1003.tar.bz2  2 years and 5 months ago 1581 main
conda 242.9 kB | noarch/r-preseqr-4.0.0-r41hc72bb7e_1002.tar.bz2  3 years and 10 months ago 2219 main
conda 242.8 kB | noarch/r-preseqr-4.0.0-r40hc72bb7e_1002.tar.bz2  3 years and 10 months ago 2142 main
conda 242.1 kB | noarch/r-preseqr-4.0.0-r40h6115d3f_1002.tar.bz2  4 years and 10 months ago 2999 main
conda 243.0 kB | noarch/r-preseqr-4.0.0-r36h6115d3f_1002.tar.bz2  4 years and 10 months ago 2955 main
conda 241.4 kB | noarch/r-preseqr-4.0.0-r35h6115d3f_1001.tar.bz2  5 years and 8 months ago 3829 main cf202003
conda 243.0 kB | noarch/r-preseqr-4.0.0-r36h6115d3f_1001.tar.bz2  5 years and 8 months ago 3886 main cf202003
conda 229.1 kB | noarch/r-preseqr-4.0.0-r351h6115d3f_1000.tar.bz2  6 years and 4 months ago 4562 main cf202003 gcc7 cf201901
conda 228.2 kB | osx-64/r-preseqr-4.0.0-r351h6115d3f_0.tar.bz2  6 years and 5 months ago 366 main cf202003 cf201901
conda 241.6 kB | win-64/r-preseqr-4.0.0-r351h6115d3f_0.tar.bz2  6 years and 5 months ago 1684 main cf202003 cf201901
conda 180.2 kB | osx-64/r-preseqr-4.0.0-r341h6115d3f_0.tar.bz2  6 years and 5 months ago 364 main cf202003 cf201901
conda 228.9 kB | linux-64/r-preseqr-4.0.0-r351h6115d3f_0.tar.bz2  6 years and 5 months ago 4645 main cf202003 cf201901
conda 180.7 kB | linux-64/r-preseqr-4.0.0-r341h6115d3f_0.tar.bz2  6 years and 5 months ago 4718 main cf202003 cf201901
conda 193.3 kB | win-64/r-preseqr-4.0.0-r341h6115d3f_0.tar.bz2  6 years and 5 months ago 1700 main cf202003 cf201901
conda 93.5 kB | osx-64/r-preseqr-3.1.2-r3.4.1_0.tar.bz2  7 years and 4 months ago 356 main cf202003 cf201901
conda 92.5 kB | osx-64/r-preseqr-3.1.2-r3.3.2_0.tar.bz2  7 years and 7 months ago 354 main cf202003 cf201901
conda 101.7 kB | win-64/r-preseqr-3.1.2-r3.4.1_0.tar.bz2  7 years and 7 months ago 1841 main cf202003 cf201901
conda 92.7 kB | linux-64/r-preseqr-3.1.2-r3.3.2_0.tar.bz2  7 years and 7 months ago 5055 main cf202003 cf201901
conda 92.9 kB | linux-64/r-preseqr-3.1.2-r3.4.1_0.tar.bz2  7 years and 7 months ago 5025 main cf202003 cf201901
conda 102.5 kB | win-64/r-preseqr-3.1.2-r3.3.2_0.tar.bz2  7 years and 7 months ago 1895 main cf202003 cf201901
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