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Provides quality control (QC), normalization, and batch effect correction operations for 'NanoString nCounter' data, Talhouk et al. (2016) <doi:10.1371/journal.pone.0153844>. Various metrics are used to determine which samples passed or failed QC. Gene expression should first be normalized to housekeeping genes, before a reference-based approach is used to adjust for batch effects. Raw NanoString data can be imported in the form of Reporter Code Count (RCC) files.

copied from cf-staging / r-nanostringr
Type Size Name Uploaded Downloads Labels
conda 571.1 kB | noarch/r-nanostringr-0.4.2-r44hc72bb7e_1.conda  4 months and 3 days ago 411 main
conda 577.4 kB | noarch/r-nanostringr-0.4.2-r43hc72bb7e_1.conda  4 months and 3 days ago 435 main
conda 575.5 kB | noarch/r-nanostringr-0.4.2-r42hc72bb7e_0.conda  6 months and 1 day ago 542 main
conda 575.4 kB | noarch/r-nanostringr-0.4.2-r43hc72bb7e_0.conda  6 months and 1 day ago 527 main

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