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conda-forge / packages / r-nanostringr 0.4.2

Provides quality control (QC), normalization, and batch effect correction operations for 'NanoString nCounter' data, Talhouk et al. (2016) <doi:10.1371/journal.pone.0153844>. Various metrics are used to determine which samples passed or failed QC. Gene expression should first be normalized to housekeeping genes, before a reference-based approach is used to adjust for batch effects. Raw NanoString data can be imported in the form of Reporter Code Count (RCC) files.

copied from cf-staging / r-nanostringr

Installers

  • noarch v0.4.2

conda install

To install this package run one of the following:
conda install conda-forge::r-nanostringr

Description


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