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conda-forge / packages / r-nanostringr

Provides quality control (QC), normalization, and batch effect correction operations for 'NanoString nCounter' data, Talhouk et al. (2016) <doi:10.1371/journal.pone.0153844>. Various metrics are used to determine which samples passed or failed QC. Gene expression should first be normalized to housekeeping genes, before a reference-based approach is used to adjust for batch effects. Raw NanoString data can be imported in the form of Reporter Code Count (RCC) files.

copied from cf-post-staging / r-nanostringr

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Type Size Name Uploaded Downloads Labels
conda 568.4 kB | noarch/r-nanostringr-0.6.1-r45hc72bb7e_1.conda  3 days and 5 hours ago 27 main
conda 567.9 kB | noarch/r-nanostringr-0.6.1-r44hc72bb7e_1.conda  3 days and 5 hours ago 30 main
conda 568.4 kB | noarch/r-nanostringr-0.6.1-r44hc72bb7e_0.conda  5 months and 5 hours ago 330 main
conda 575.8 kB | noarch/r-nanostringr-0.6.1-r43hc72bb7e_0.conda  5 months and 5 hours ago 329 main
conda 578.6 kB | noarch/r-nanostringr-0.6.0-r43hc72bb7e_0.conda  5 months and 9 days ago 319 main
conda 573.0 kB | noarch/r-nanostringr-0.6.0-r44hc72bb7e_0.conda  5 months and 9 days ago 335 main
conda 568.0 kB | noarch/r-nanostringr-0.5.0-r44hc72bb7e_0.conda  8 months and 9 hours ago 1210 main
conda 574.6 kB | noarch/r-nanostringr-0.5.0-r43hc72bb7e_0.conda  8 months and 9 hours ago 1209 main
conda 571.1 kB | noarch/r-nanostringr-0.4.2-r44hc72bb7e_1.conda  1 year and 1 month ago 1050 main
conda 577.4 kB | noarch/r-nanostringr-0.4.2-r43hc72bb7e_1.conda  1 year and 1 month ago 1065 main
conda 575.5 kB | noarch/r-nanostringr-0.4.2-r42hc72bb7e_0.conda  1 year and 3 months ago 1172 main
conda 575.4 kB | noarch/r-nanostringr-0.4.2-r43hc72bb7e_0.conda  1 year and 3 months ago 1169 main
conda 577.6 kB | noarch/r-nanostringr-0.4.1-r42hc72bb7e_0.conda  2 years and 1 month ago 1347 main
conda 577.7 kB | noarch/r-nanostringr-0.4.1-r43hc72bb7e_0.conda  2 years and 1 month ago 1410 main
conda 574.5 kB | noarch/r-nanostringr-0.4.0-r42hc72bb7e_2.conda  2 years and 3 months ago 1533 main
conda 573.8 kB | noarch/r-nanostringr-0.4.0-r43hc72bb7e_2.conda  2 years and 3 months ago 1518 main
conda 605.6 kB | noarch/r-nanostringr-0.4.0-r42hc72bb7e_1.tar.bz2  2 years and 11 months ago 1823 main
conda 605.9 kB | noarch/r-nanostringr-0.4.0-r41hc72bb7e_1.tar.bz2  2 years and 11 months ago 1773 main
conda 605.8 kB | noarch/r-nanostringr-0.4.0-r40hc72bb7e_0.tar.bz2  3 years and 1 month ago 2004 main
conda 605.9 kB | noarch/r-nanostringr-0.4.0-r41hc72bb7e_0.tar.bz2  3 years and 1 month ago 2009 main
conda 591.5 kB | noarch/r-nanostringr-0.3.0-r41hc72bb7e_0.tar.bz2  3 years and 4 months ago 2348 main
conda 590.5 kB | noarch/r-nanostringr-0.3.0-r40hc72bb7e_0.tar.bz2  3 years and 4 months ago 2333 main
conda 309.1 kB | noarch/r-nanostringr-0.2.0-r41hc72bb7e_0.tar.bz2  4 years and 4 months ago 2509 main
conda 308.7 kB | noarch/r-nanostringr-0.2.0-r40hc72bb7e_0.tar.bz2  4 years and 7 months ago 2669 main
conda 308.7 kB | noarch/r-nanostringr-0.2.0-r36hc72bb7e_0.tar.bz2  4 years and 7 months ago 2702 main
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