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The core of the package is cvr2.ipflasso(), an extension of glmnet to be used when the (large) set of available predictors is partitioned into several modalities which potentially differ with respect to their information content in terms of prediction. For example, in biomedical applications patient outcome such as survival time or response to therapy may have to be predicted based on, say, mRNA data, miRNA data, methylation data, CNV data, clinical data, etc. The clinical predictors are on average often much more important for outcome prediction than the mRNA data. The ipflasso method takes this problem into account by using different penalty parameters for predictors from different modalities. The ratio between the different penalty parameters can be chosen by cross-validation.

copied from cf-staging / r-ipflasso
Type Size Name Uploaded Downloads Labels
conda 72.7 kB | noarch/r-ipflasso-1.1-r44hc72bb7e_4.conda  1 year and 23 days ago 907 main
conda 71.1 kB | noarch/r-ipflasso-1.1-r43hc72bb7e_4.conda  1 year and 23 days ago 907 main
conda 71.0 kB | noarch/r-ipflasso-1.1-r42hc72bb7e_3.conda  2 years and 1 month ago 1327 main
conda 71.1 kB | noarch/r-ipflasso-1.1-r43hc72bb7e_3.conda  2 years and 1 month ago 1364 main
conda 71.6 kB | noarch/r-ipflasso-1.1-r41hc72bb7e_2.tar.bz2  2 years and 9 months ago 1691 main
conda 71.7 kB | noarch/r-ipflasso-1.1-r42hc72bb7e_2.tar.bz2  2 years and 9 months ago 1693 main
conda 70.7 kB | noarch/r-ipflasso-1.1-r40hc72bb7e_1.tar.bz2  4 years and 2 months ago 2352 main
conda 70.7 kB | noarch/r-ipflasso-1.1-r41hc72bb7e_1.tar.bz2  4 years and 2 months ago 2377 main
conda 70.5 kB | noarch/r-ipflasso-1.1-r36h6115d3f_1.tar.bz2  5 years and 3 months ago 3193 main
conda 70.3 kB | noarch/r-ipflasso-1.1-r40h6115d3f_1.tar.bz2  5 years and 3 months ago 3236 main
conda 70.3 kB | noarch/r-ipflasso-1.1-r36h6115d3f_0.tar.bz2  5 years and 7 months ago 3717 main cf202003
conda 69.9 kB | noarch/r-ipflasso-1.1-r35h6115d3f_0.tar.bz2  5 years and 7 months ago 3654 main cf202003
conda 53.8 kB | noarch/r-ipflasso-0.2-r36h6115d3f_1.tar.bz2  6 years and 20 days ago 4045 main cf202003
conda 53.5 kB | noarch/r-ipflasso-0.2-r35h6115d3f_1.tar.bz2  6 years and 20 days ago 4014 main cf202003
conda 53.4 kB | noarch/r-ipflasso-0.2-r351h6115d3f_0.tar.bz2  6 years and 3 months ago 4229 main cf202003
conda 53.4 kB | noarch/r-ipflasso-0.1-r351h6115d3f_1000.tar.bz2  6 years and 7 months ago 4566 main cf202003 gcc7 cf201901
conda 53.8 kB | noarch/r-ipflasso-0.1-r351h6115d3f_0.tar.bz2  6 years and 7 months ago 4512 main cf202003 gcc7 cf201901

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