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bioconda / packages / ucsc-estorient

Read ESTs from a database and determine orientation based on estOrientInfo table or direction in gbCdnaInfo table. Update PSLs so that the strand reflects the direction of transcription. By default, PSLs where the direction can't be determined are dropped.

Type Size Name Uploaded Downloads Labels
conda 2.0 MB | linux-64/ucsc-estorient-469-h9b8f530_0.tar.bz2  1 month and 9 days ago 111 main
conda 188.5 kB | linux-64/ucsc-estorient-377-ha8a8165_3.tar.bz2  2 years and 8 months ago 322 main
conda 187.9 kB | linux-64/ucsc-estorient-377-h0b8a92a_2.tar.bz2  3 years and 6 months ago 181 main
conda 842.6 kB | osx-64/ucsc-estorient-377-h516baf0_1.tar.bz2  4 years and 1 month ago 83 main
conda 176.1 kB | linux-64/ucsc-estorient-377-h446ed27_1.tar.bz2  4 years and 1 month ago 159 main
conda 840.6 kB | linux-64/ucsc-estorient-377-h199ee4e_0.tar.bz2  5 years and 7 months ago 265 main
conda 789.8 kB | osx-64/ucsc-estorient-377-h8b15c51_0.tar.bz2  5 years and 7 months ago 3917 main
conda 2.5 MB | linux-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  6 years and 3 months ago 452 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-366-h5eb252a_0.tar.bz2  6 years and 3 months ago 4066 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-h5eb252a_2.tar.bz2  6 years and 3 months ago 3799 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-1.tar.bz2  6 years and 8 months ago 476 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-1.tar.bz2  6 years and 8 months ago 303 main cf201901
conda 2.4 MB | linux-64/ucsc-estorient-357-0.tar.bz2  6 years and 10 months ago 697 main cf201901
conda 2.1 MB | osx-64/ucsc-estorient-357-0.tar.bz2  6 years and 10 months ago 67 main cf201901
conda 1.7 MB | osx-64/ucsc-estorient-332-0.tar.bz2  8 years and 4 months ago 8078 main cf201901
conda 1.7 MB | linux-64/ucsc-estorient-332-0.tar.bz2  8 years and 4 months ago 809 main cf201901

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